Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Mitochodrial transcription termination factor-related

Term: IPR003690  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene260 biogeco2 v2.0 1047
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
N-terminus
biog2_v2.0_unigene1611 biogeco2 v2.0 383
AutoFact: WS00727.B21_N20 WS-PS-N-A-8 Picea glauca cDNA clone WS00727_N20 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene1723 biogeco2 v2.0 513
AutoFact: DUF810 domain containing protein 2.0e-22
Blast2go: uncharacterized protein 0.0
unknown
biog2_v2.0_unigene2188 biogeco2 v2.0 335
AutoFact: mTERF domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene2322 biogeco2 v2.0 275
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAH20130.1| AT5G46840 [Arabidopsis thaliana] gb|AED95433.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
Blast2go: rna recognition motif-containing protein 0.0
unknown
biog2_v2.0_unigene3605 biogeco2 v2.0 223
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
Putative C-terminus
biog2_v2.0_unigene7937 biogeco2 v2.0 565
AutoFact: DUF810 domain containing protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein loc100248009 0.0
Putative C-terminus
biog2_v2.0_unigene8072 biogeco2 v2.0 606
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
N-terminus
biog2_v2.0_unigene9153 biogeco2 v2.0 434
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 5.19643e-17
N-terminus
biog2_v2.0_unigene9284 biogeco2 v2.0 425
AutoFact: protoporphyrinogen oxidase [Arabidopsis thaliana] gb|AAL77672.1| AT5g14220/MUA22_22 [Arabidopsis thaliana] gb|AAM26644.1| AT5g14220/MUA22_22 [Arabidopsis thaliana] gb|AED92001.1| protoporphyrinogen oxidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protoporphyrinogen oxidase 0.0
N-terminus
biog2_v2.0_unigene9835 biogeco2 v2.0 430
AutoFact: mTERF domain containing protein 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor 0.0
C-terminus
biog2_v2.0_unigene9855 biogeco2 v2.0 441
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
unknown
biog2_v2.0_unigene11578 biogeco2 v2.0 398
AutoFact: protoporphyrinogen IX oxidase [Glycine max] 0.0
Blast2go: mitochondrial protoporphyrinogen oxidase 0.0
unknown
biog2_v2.0_unigene13028 biogeco2 v2.0 314
AutoFact: transcription termination factor domain-containing protein [Arabidopsis thaliana] gb|AAC23410.1| expressed protein [Arabidopsis thaliana] gb|AAK64024.1| unknown protein [Arabidopsis thaliana] gb|AAL85111.1| unknown protein [Arabidopsis thaliana] gb|AEC103 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mterf family protein 0.0
Putative C-terminus
biog2_v2.0_unigene14172 biogeco2 v2.0 434
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene14177 biogeco2 v2.0 322
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.05121e-36
Internal
biog2_v2.0_unigene14497 biogeco2 v2.0 587
AutoFact: mTERF domain containing protein 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100268158 0.0
N-terminus
biog2_v2.0_unigene15627 biogeco2 v2.0 468
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
Putative C-terminus
biog2_v2.0_unigene16004 biogeco2 v2.0 317
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gb|AAC17042.1| Contains similarity to myb protein homolog gb|Z13997 from Petunia hybrida [Arabidopsis thaliana] gb|AEE36218.1| Mitochondrial transcription termination fac 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
N-terminus
biog2_v2.0_unigene16374 biogeco2 v2.0 505
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain