Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene356 biogeco2 v2.0 601
AutoFact: Glycosyltransferase n=2 Tax=Solanum RepID=Q50HV0_SOLLC 0.0
Blast2go: probable beta- -xylosyltransferase irx14h-like 0.0
unknown
biog2_v2.0_unigene387 biogeco2 v2.0 511
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta 0.0
Internal
biog2_v2.0_unigene689 biogeco2 v2.0 497
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
Blast2go: major facilitator protein 0.0
Putative coding
biog2_v2.0_unigene951 biogeco2 v2.0 805
AutoFact: Glycosyltransferase n=2 Tax=Solanum RepID=Q50HV0_SOLLC 0.0
FL-Next: sp=Probable beta-1,4-xylosyltransferase IRX14H; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable beta- -xylosyltransferase irx14h-like 0.0
Internal
biog2_v2.0_unigene1043 biogeco2 v2.0 468
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
C-terminus
biog2_v2.0_unigene1227 biogeco2 v2.0 740
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
Internal
biog2_v2.0_unigene1372 biogeco2 v2.0 721
AutoFact: MORN domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene2025 biogeco2 v2.0 520
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
Internal
biog2_v2.0_unigene2032 biogeco2 v2.0 530
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Complete
biog2_v2.0_unigene2145 biogeco2 v2.0 663
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta 0.0
Internal
biog2_v2.0_unigene2929 biogeco2 v2.0 711
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 7 emb|CAH67152.1| OSIGBa0122F23.9 [Oryza sativa Indica Group] 4.0e-37
Blast2go: squamosa promoter-binding-like protein 7-like 0.0
unknown
biog2_v2.0_unigene3680 biogeco2 v2.0 410
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
biog2_v2.0_unigene3809 biogeco2 v2.0 266
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
C-terminus
biog2_v2.0_unigene3923 biogeco2 v2.0 391
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
unknown
biog2_v2.0_unigene4608 biogeco2 v2.0 889
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
C-terminus
biog2_v2.0_unigene4800 biogeco2 v2.0 877
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
Blast2go: protein 0.0
Putative coding
biog2_v2.0_unigene4815 biogeco2 v2.0 461
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Blast2go: f-box family protein 3.1703e-41
Putative N-terminus
biog2_v2.0_unigene5003 biogeco2 v2.0 1111
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 0.0
C-terminus
biog2_v2.0_unigene5184 biogeco2 v2.0 1730
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Complete
biog2_v2.0_unigene5813 biogeco2 v2.0 433
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain