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Assembly Name: biogeco2 v2.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene6044 biogeco2 v2.0 644
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 2.8026e-45
N-terminus
biog2_v2.0_unigene6049 biogeco2 v2.0 570
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
unknown
biog2_v2.0_unigene6155 biogeco2 v2.0 1562
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta chain 0.0
Complete
biog2_v2.0_unigene6163 biogeco2 v2.0 1226
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
N-terminus
biog2_v2.0_unigene6176 biogeco2 v2.0 535
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 2.8026e-45
Complete
biog2_v2.0_unigene6279 biogeco2 v2.0 622
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
N-terminus
biog2_v2.0_unigene7018 biogeco2 v2.0 697
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene7115 biogeco2 v2.0 604
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Complete
biog2_v2.0_unigene7203 biogeco2 v2.0 650
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene7571 biogeco2 v2.0 495
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
C-terminus
biog2_v2.0_unigene7768 biogeco2 v2.0 599
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
C-terminus
biog2_v2.0_unigene8203 biogeco2 v2.0 472
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma tubulin 0.0
N-terminus
biog2_v2.0_unigene8365 biogeco2 v2.0 819
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 0.0
N-terminus
biog2_v2.0_unigene8505 biogeco2 v2.0 504
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene8600 biogeco2 v2.0 287
AutoFact: putative protein kinase [Arabidopsis thaliana] 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase oxi1-like 0.0
Putative C-terminus
biog2_v2.0_unigene8900 biogeco2 v2.0 415
AutoFact: Glycosyltransferase n=4 Tax=Andropogoneae RepID=Q50HU8_SACOF 0.0
FL-Next: sp=Probable glucuronosyltransferase Os06g0687900; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glycosyltransferase 0.0
Putative C-terminus
biog2_v2.0_unigene9009 biogeco2 v2.0 451
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Internal
biog2_v2.0_unigene9249 biogeco2 v2.0 473
AutoFact: ATP-synt_B multi-domain protein 6.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene10195 biogeco2 v2.0 541
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
Internal
biog2_v2.0_unigene10374 biogeco2 v2.0 1718
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain