Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: SWIRM domain

Term: IPR007526  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene9190 biogeco2 v2.0 571
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0T3_RICCO 2.0e-32
FL-Next: tr=Dof domain zinc finger DNA-binding protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: dof zinc finger protein 8.13057e-36
Internal
biog2_v2.0_unigene9700 biogeco2 v2.0 477
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
Internal
biog2_v2.0_unigene10742 biogeco2 v2.0 456
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Internal
biog2_v2.0_unigene11040 biogeco2 v2.0 277
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
Internal
biog2_v2.0_unigene11392 biogeco2 v2.0 343
AutoFact: Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] emb|CAB87783.1| putative protein [Arabidopsis thaliana] dbj|BAF01166.1| hypothetical protein [Arabidopsis thaliana] gb|AED92035.1| Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: surfeit locus protein 2 0.0
N-terminus
biog2_v2.0_unigene12127 biogeco2 v2.0 391
AutoFact: Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] emb|CAB87783.1| putative protein [Arabidopsis thaliana] dbj|BAF01166.1| hypothetical protein [Arabidopsis thaliana] gb|AED92035.1| Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: surfeit locus protein 2 0.0
C-terminus
biog2_v2.0_unigene16803 biogeco2 v2.0 381
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3c-like 0.0
Internal
biog2_v2.0_unigene16813 biogeco2 v2.0 738
AutoFact: SWI/SNF complex subunit SWI3A [Arabidopsis thaliana] sp|Q8W475.1|SWI3A_ARATH RecName: Full=SWI/SNF complex subunit SWI3A; Short=AtSWI3A; AltName: Full=Transcription regulatory protein SWI3A gb|AAL32872.1| putative SWI/SNF family transcription activator [A 0.0
FL-Next: sp=SWI/SNF complex subunit SWI3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3a 0.0
Putative C-terminus
biog2_v2.0_unigene17161 biogeco2 v2.0 379
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 2.0e-32
Blast2go: lysine-specific histone demethylase-like protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain