Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Radical SAM

Term: IPR007197  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13250 biogeco2 v2.0 366
AutoFact: UPF0004 multi-domain protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
Internal
biog2_v2.0_unigene14625 biogeco2 v2.0 525
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal rna large subunit methyltransferase n 0.0
N-terminus
biog2_v2.0_unigene15069 biogeco2 v2.0 381
AutoFact: FO synthase [Azoarcus sp. EbN1] emb|CAI10697.1| hypothetical protein, similar to ThiH,4-methyl-5(beta-hydroxyethyl)thiazole phosphate synthesis [Aromatoleum aromaticum EbN1] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: fo synthase 0.0
C-terminus
biog2_v2.0_unigene15280 biogeco2 v2.0 227
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDZ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Internal
biog2_v2.0_unigene16313 biogeco2 v2.0 439
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9R7T9_RICCO 3.0e-20
Blast2go: flavodoxin family protein 7.87833e-21
unknown
biog2_v2.0_unigene16713 biogeco2 v2.0 161
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
Blast2go: ankyrin-like protein 0.0
unknown
biog2_v2.0_unigene17345 biogeco2 v2.0 369
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ankyrin-like protein 0.0
Internal
biog2_v2.0_unigene17443 biogeco2 v2.0 355
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana GN=CBSDUF1 0.0
Blast2go: duf21 domain-containing protein at4g14240-like 0.0
Internal
biog2_v2.0_unigene18197 biogeco2 v2.0 184
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
Blast2go: ankyrin-like protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain