Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Helix-hairpin-helix motif

Term: IPR000445  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1983 biogeco2 v2.0 804
AutoFact: DNA repair protein RAD51 homolog n=1 Tax=Solanum lycopersicum RepID=RAD51_SOLLC 0.0
FL-Next: sp=DNA repair protein RAD51 homolog B; Zea mays (Maize). 0.0
Blast2go: dna repair protein rad51 homolog 0.0
C-terminus
biog2_v2.0_unigene10690 biogeco2 v2.0 408
AutoFact: Nuclear cap-binding protein subunit 2 n=3 Tax=Andropogoneae RepID=B6TL33_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear cap-binding protein 0.0
C-terminus
biog2_v2.0_unigene14803 biogeco2 v2.0 303
AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
Blast2go: a g-specific adenine dna glycosylase 0.0
Putative coding
biog2_v2.0_unigene16010 biogeco2 v2.0 318
AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: a g-specific adenine dna glycosylase 0.0
Putative N-terminus
biog2_v2.0_unigene16224 biogeco2 v2.0 335
AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
Blast2go: a g-specific adenine dna glycosylase 0.0
unknown
biog2_v2.0_unigene16698 biogeco2 v2.0 298
AutoFact: ubiquitin conjugating enzyme-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubc37 like protein 0.0
N-terminus
biog2_v2.0_unigene17709 biogeco2 v2.0 1078
AutoFact: Excision repair cross-complementing 1 ercc1, putative n=1 Tax=Ricinus communis RepID=B9RF25_RICCO 0.0
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna excision repair protein ercc-1 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain