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Assembly Name: biogeco2 v2.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene19 biogeco2 v2.0 269
AutoFact: PREDICTED: similar to binding n=1 Tax=Vitis vinifera RepID=UPI00019836A8 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
unknown
biog2_v2.0_unigene64 biogeco2 v2.0 719
AutoFact: Gamma-soluble NSF attachment protein [Arabidopsis thaliana] sp|Q9SPE5.1|SNAG_ARATH RecName: Full=Gamma-soluble NSF attachment protein; Short=Gamma-SNAP; AltName: Full=N-ethylmaleimide-sensitive factor attachment protein gamma gb|AAF01285.1|AF177990_1 gamm 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma-soluble nsf attachment protein 0.0
C-terminus
biog2_v2.0_unigene155 biogeco2 v2.0 780
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene178 biogeco2 v2.0 619
AutoFact: CTR1-like protein kinase n=1 Tax=Rosa hybrid cultivar RepID=Q93XL9_ROSHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctr1-like protein kinase 0.0
C-terminus
biog2_v2.0_unigene311 biogeco2 v2.0 1331
AutoFact: TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab] gb|ABD00149.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab] 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide tpr_1 repeat-containing protein 0.0
Putative Complete
biog2_v2.0_unigene484 biogeco2 v2.0 989
AutoFact: Os10g0486900 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XD86_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat protein 1-like 0.0
Complete
biog2_v2.0_unigene564 biogeco2 v2.0 315
AutoFact: Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] ref|NP_850718.1| Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] gb|AAK83572.1| AT3g58640/F14P22_230 [Arabidopsis thaliana] gb|AAM98106.1 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: mitogen activated protein kinase kinase kinase-like protein 0.0
Internal
biog2_v2.0_unigene604 biogeco2 v2.0 821
AutoFact: Ethylene-overproduction protein 1 n=5 Tax=Brassicaceae RepID=ETO1_ARATH 0.0
FL-Next: sp=Ethylene-overproduction protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
biog2_v2.0_unigene701 biogeco2 v2.0 655
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light 0.0
Internal
biog2_v2.0_unigene746 biogeco2 v2.0 856
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: o-linked c transferase like protein 0.0
C-terminus
biog2_v2.0_unigene1237 biogeco2 v2.0 890
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
biog2_v2.0_unigene1397 biogeco2 v2.0 430
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ricinus communis RepID=B9T6J3_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase cyp19-4-like 0.0
Putative C-terminus
biog2_v2.0_unigene1646 biogeco2 v2.0 730
AutoFact: RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] ref|NP_680223.1| RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] gb|AED93480.1| RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] gb|AED93481.1| RNA polymerase I 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit l-like 0.0
Internal
biog2_v2.0_unigene1848 biogeco2 v2.0 731
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAO00795.1| Unknown protein [Arabidopsis thaliana] gb|AAP13399.1| At3g05625 [Arabidopsis thaliana] gb|AEE74268.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr repeat 0.0
C-terminus
biog2_v2.0_unigene1898 biogeco2 v2.0 619
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 3.0e-29
Blast2go: tpr domain protein 0.0
unknown
biog2_v2.0_unigene1910 biogeco2 v2.0 931
AutoFact: ABI3-interacting protein 2 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF6_9CONI 0.0
FL-Next: tr=ABI3-interacting protein 2; Callitropsis nootkatensis. 0.0
Blast2go: protein frigida-like 0.0
N-terminus
biog2_v2.0_unigene2066 biogeco2 v2.0 688
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4KEY9_ARATH 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene2116 biogeco2 v2.0 592
AutoFact: Glycoside hydrolase family 17 protein n=2 Tax=Eumusa RepID=Q1EP15_MUSBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light chain-like protein 0.0
Internal
biog2_v2.0_unigene2181 biogeco2 v2.0 1356
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAK44004.1|AF370189_1 unknown protein [Arabidopsis thaliana] gb|AAL33778.1| unknown protein [Arabidopsis thaliana] gb|AEE86768.1| tetratricopeptide repeat domain-containing prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr domain containing protein 0.0
C-terminus
biog2_v2.0_unigene2192 biogeco2 v2.0 465
AutoFact: Chaperone binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTA1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain