Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: B3 DNA binding domain

Term: IPR003340  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene10954 biogeco2 v2.0 242
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
unknown
biog2_v2.0_unigene11191 biogeco2 v2.0 187
AutoFact: AP2/B3 domain-containing transcription factor [Arabidopsis thaliana] sp|Q1G3M3.1|Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184 gb|ABF59230.1| unknown protein [Arabidopsis thaliana] dbj|BAH30459.1| hypothetical protein [Arabidopsis thali 4.06377e-44
Blast2go: dna binding protein 0.0
unknown
biog2_v2.0_unigene11428 biogeco2 v2.0 293
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: sp=Auxin response factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: auxin response factor 6-like 0.0
Putative N-terminus
biog2_v2.0_unigene11946 biogeco2 v2.0 157
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
unknown
biog2_v2.0_unigene12518 biogeco2 v2.0 416
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 0.0
Complete
biog2_v2.0_unigene13069 biogeco2 v2.0 120
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
Blast2go: auxin response factor 6-like 0.0
unknown
biog2_v2.0_unigene13307 biogeco2 v2.0 165
AutoFact: AP2/B3 domain-containing transcription factor [Arabidopsis thaliana] sp|Q1G3M3.1|Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184 gb|ABF59230.1| unknown protein [Arabidopsis thaliana] dbj|BAH30459.1| hypothetical protein [Arabidopsis thali 4.00001e-41
FL-Next: sp=B3 domain-containing protein Os05g0481400; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: b3 domain-containing protein 0.0
Internal
biog2_v2.0_unigene14493 biogeco2 v2.0 501
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Putative N-terminus
biog2_v2.0_unigene14665 biogeco2 v2.0 411
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor-like protein 0.0
Putative N-terminus
biog2_v2.0_unigene16184 biogeco2 v2.0 422
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
Blast2go: auxin response 0.0
unknown
biog2_v2.0_unigene17385 biogeco2 v2.0 297
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
Internal
biog2_v2.0_unigene17900 biogeco2 v2.0 732
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ephedra distachya RepID=E1UHX6_EPHDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arf6 0.0
C-terminus
biog2_v2.0_unigene18262 biogeco2 v2.0 508
AutoFact: putative RAV2-like DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=APETALA2-like protein 2; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ap2 erf and b3 domain-containing transcription factor rav2 0.0
Internal
biog2_v2.0_unigene18393 biogeco2 v2.0 367
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
N-terminus
biog2_v2.0_unigene18490 biogeco2 v2.0 320
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain