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Assembly Name: biogeco2 v2.0

Name: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

Term: IPR006151  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1057 biogeco2 v2.0 502
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dehydroquinate dehydratase shikimate dehydrogenase 0.0
Internal
biog2_v2.0_unigene1239 biogeco2 v2.0 588
AutoFact: Glutamyl-tRNA reductase n=4 Tax=Coniferales RepID=B8LN13_PICSI 0.0
FL-Next: sp=Glutamyl-tRNA reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna reductase 0.0
Internal
biog2_v2.0_unigene1335 biogeco2 v2.0 443
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional 3-dehydroquinate dehydratase shikimate chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene2007 biogeco2 v2.0 474
AutoFact: Glutamyl-tRNA reductase n=4 Tax=Coniferales RepID=B8LN13_PICSI 0.0
FL-Next: sp=Glutamyl-tRNA reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna reductase 0.0
Internal
biog2_v2.0_unigene3134 biogeco2 v2.0 1237
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional 3-dehydroquinate dehydratase shikimate chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene5305 biogeco2 v2.0 542
AutoFact: putative transport protein [Gymnadenia conopsea] 3.0e-12
FL-Next: sp=Protein transport protein Sec61 subunit beta; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein transport protein sec61 subunit beta 4.99037e-25
Complete
biog2_v2.0_unigene9177 biogeco2 v2.0 347
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dehydroquinate dehydratase shikimate dehydrogenase 0.0
C-terminus
biog2_v2.0_unigene9886 biogeco2 v2.0 326
AutoFact: Glutamyl-tRNA reductase n=4 Tax=Coniferales RepID=B8LN13_PICSI 0.0
Blast2go: glutamyl-trna reductase 0.0
unknown
biog2_v2.0_unigene13394 biogeco2 v2.0 416
AutoFact: Glutamyl-tRNA reductase n=4 Tax=Coniferales RepID=B8LN13_PICSI 0.0
FL-Next: sp=Glutamyl-tRNA reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna reductase 0.0
C-terminus
biog2_v2.0_unigene13854 biogeco2 v2.0 551
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans regia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional 3-dehydroquinate dehydratase shikimate chloroplastic-like 0.0
Internal
biog2_v2.0_unigene19887 biogeco2 v2.0 568
AutoFact: pfam03911, Sec61_beta, Sec61beta family 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transport protein sec61 beta subunit 4.31151e-26
Putative Complete
biog2_v2.0_unigene19901 biogeco2 v2.0 373
AutoFact: Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana] ref|NP_974467.1| Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana] emb|CAB81840.1| transport protein subunit-like [Arabidopsis thaliana] gb|AEE80076. 3.0e-09
Blast2go: preprotein translocase sec61-beta subunit protein 2.69394e-20
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain