Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Ribosomal protein S2, conserved site

Term: IPR018130  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene10021 biogeco2 v2.0 607
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative N-terminus
biog2_v2.0_unigene10073 biogeco2 v2.0 770
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Internal
biog2_v2.0_unigene10272 biogeco2 v2.0 113
AutoFact: Putative 40S Ribosomal protein [Oryza sativa Japonica Group] gb|ABF94325.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] gb|EAZ25828.1| hypothetical protein OsJ_09668 [Oryza sativa Japonica Group] gb|ACJ54906.1| 40S ribosoma 0.0
Blast2go: 40s ribosomal protein sa 0.0
unknown
biog2_v2.0_unigene10530 biogeco2 v2.0 684
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
Putative N-terminus
biog2_v2.0_unigene10558 biogeco2 v2.0 555
AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 7.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
N-terminus
biog2_v2.0_unigene10659 biogeco2 v2.0 377
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.60416e-40
Internal
biog2_v2.0_unigene11097 biogeco2 v2.0 449
AutoFact: pfam03735, ENT, ENT domain 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100263217 0.0
Internal
biog2_v2.0_unigene11411 biogeco2 v2.0 569
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9GP57_POPTR 0.0
FL-Next: tr=Cationic amino acid transporter 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized amino acid permease -like 0.0
N-terminus
biog2_v2.0_unigene11690 biogeco2 v2.0 415
AutoFact: MRP-like ABC transporter n=2 Tax=Oryza sativa Japonica Group RepID=Q8GU62_ORYSJ 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 3 2.95916e-23
C-terminus
biog2_v2.0_unigene11993 biogeco2 v2.0 240
AutoFact: Prolyl endopeptidase, putative n=1 Tax=Ricinus communis RepID=B9R8I0_RICCO 0.0
FL-Next: tr=Serine-type endopeptidase; Cucumis melo subsp. melo. 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene12059 biogeco2 v2.0 345
AutoFact: Sulfate transporter, putative n=1 Tax=Ricinus communis RepID=B9SQC2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sulfate transporter 0.0
Internal
biog2_v2.0_unigene12207 biogeco2 v2.0 598
AutoFact: glycosyl hydrolases family 17 domain-containing protein [Arabidopsis thaliana] gb|AEE31176.1| glycosyl hydrolases family 17 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene12560 biogeco2 v2.0 292
AutoFact: Hydroxysteroid dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9R8T2_RICCO 0.0
Blast2go: short-chain dehydrogenase reductase family 42e member 1-like 0.0
unknown
biog2_v2.0_unigene12586 biogeco2 v2.0 577
AutoFact: Multidrug resistance-associated protein 1 n=1 Tax=Phaseolus vulgaris RepID=E3Q0A7_PHAVU 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 5-like 2.66787e-28
C-terminus
biog2_v2.0_unigene12677 biogeco2 v2.0 397
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9R8R1_RICCO 0.0
Blast2go: beta- -glucanase 0.0
unknown
biog2_v2.0_unigene12759 biogeco2 v2.0 296
AutoFact: O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] dbj|BAB01853.1| beta-1,3-glucanase [Arabidopsis thaliana] gb|ABE65959.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] gb|AEE76811.1| O-Glycosyl hydrolases family 17 protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene13292 biogeco2 v2.0 527
AutoFact: Os06g0125400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0DF09_ORYSJ 0.0
FL-Next: sp=Oligopeptide transporter 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: oligopeptide transporter 7-like 0.0
Putative C-terminus
biog2_v2.0_unigene13519 biogeco2 v2.0 435
AutoFact: putative prolyl endopeptidase [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene13789 biogeco2 v2.0 503
AutoFact: r-interacting factor1 [Zea mays] gb|ABR67045.1| R-interacting factor 1 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: emsy n terminus domain-containing protein 0.0
Internal
biog2_v2.0_unigene13889 biogeco2 v2.0 378
AutoFact: RecName: Full=ABC transporter C family member 10; Short=ABC transporter ABCC.10; Short=AtABCC10; AltName: Full=ATP-energized glutathione S-conjugate pump 14; AltName: Full=Glutathione S-conjugate-transporting ATPase 14; AltName: Full=Multidrug resistance- 0.0
FL-Next: sp=ABC transporter C family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain