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Assembly Name: biogeco2 v2.0

Name: 2-oxo acid dehydrogenase, lipoyl-binding site

Term: IPR003016  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene99 biogeco2 v2.0 390
AutoFact: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SLH2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase mitochondrial-like 0.0
C-terminus
biog2_v2.0_unigene185 biogeco2 v2.0 403
AutoFact: glycine decarboxylase complex H-protein [Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine decarboxylase complex h-protein 0.0
N-terminus
biog2_v2.0_unigene260 biogeco2 v2.0 1047
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
N-terminus
biog2_v2.0_unigene604 biogeco2 v2.0 821
AutoFact: Ethylene-overproduction protein 1 n=5 Tax=Brassicaceae RepID=ETO1_ARATH 0.0
FL-Next: sp=Ethylene-overproduction protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
biog2_v2.0_unigene824 biogeco2 v2.0 862
AutoFact: ribophorin II (RPN2) family protein [Arabidopsis thaliana] ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribophorin ii family protein 0.0
Putative Complete
biog2_v2.0_unigene2558 biogeco2 v2.0 646
AutoFact: ribophorin II (RPN2) family protein [Arabidopsis thaliana] ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ribophorin ii family protein 0.0
C-terminus
biog2_v2.0_unigene2718 biogeco2 v2.0 785
AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asparaginyl-trna cytoplasmic 1-like 0.0
C-terminus
biog2_v2.0_unigene3605 biogeco2 v2.0 223
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
Putative C-terminus
biog2_v2.0_unigene4518 biogeco2 v2.0 1743
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_116.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=E0CVQ8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-oxoglutarate dehydrogenase e2 subunit 0.0
Complete
biog2_v2.0_unigene4781 biogeco2 v2.0 544
AutoFact: BTB domain containing protein 2.0e-05
FL-Next: sp=ETO1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: eto1-like protein 1-like 0.0
C-terminus
biog2_v2.0_unigene5975 biogeco2 v2.0 757
AutoFact: Glycine cleavage system h protein, putative n=1 Tax=Ricinus communis RepID=B9S1I0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial glycine decarboxylase complex h-protein 0.0
Complete
biog2_v2.0_unigene7523 biogeco2 v2.0 765
AutoFact: dihydrolipoamide acetyltransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase mitochondrial-like 0.0
N-terminus
biog2_v2.0_unigene7580 biogeco2 v2.0 601
AutoFact: dihydrolipoamide S-acetyltransferase precursor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex 0.0
C-terminus
biog2_v2.0_unigene7683 biogeco2 v2.0 780
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_850516.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL07141.1| unknown protein [Arabidopsis thaliana] gb|AAM83246.1| AT3g05090/T12H1_5 [Arabidopsis thalia 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: wd repeat-containing protein 48-like 0.0
C-terminus
biog2_v2.0_unigene8013 biogeco2 v2.0 487
AutoFact: glycine decarboxylase complex H-protein [Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine decarboxylase complex h-protein 0.0
C-terminus
biog2_v2.0_unigene8142 biogeco2 v2.0 515
AutoFact: Chloroplast homogentisate phytyltransferase n=2 Tax=apioid superclade RepID=B2Z8W9_CORSA 0.0
FL-Next: sp=Probable homogentisate phytyltransferase 1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: homogentisate phytyltransferase vte2-1 0.0
Internal
biog2_v2.0_unigene8370 biogeco2 v2.0 473
AutoFact: dihydrolipoamide acetyltransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase mitochondrial-like 0.0
C-terminus
biog2_v2.0_unigene8441 biogeco2 v2.0 516
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_850516.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL07141.1| unknown protein [Arabidopsis thaliana] gb|AAM83246.1| AT3g05090/T12H1_5 [Arabidopsis thalia 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: wd repeat-containing protein 48-like 0.0
Internal
biog2_v2.0_unigene8502 biogeco2 v2.0 810
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
Putative coding
biog2_v2.0_unigene8529 biogeco2 v2.0 671
AutoFact: zinc carboxy peptidase [Brachypodium sylvaticum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: carboxypeptidase d 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain