Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene368 biogeco2 v2.0 886
AutoFact: Subtilisin-like protease n=2 Tax=Arabidopsis RepID=SUBL_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease 0.0
Putative C-terminus
biog2_v2.0_unigene372 biogeco2 v2.0 453
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 1-like 0.0
Putative C-terminus
biog2_v2.0_unigene614 biogeco2 v2.0 495
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
C-terminus
biog2_v2.0_unigene785 biogeco2 v2.0 304
AutoFact: leucine-rich repeat-like protein [Arabidopsis thaliana] gb|AAG52300.1|AC011020_7 putative receptor protein kinase [Arabidopsis thaliana] gb|AAC18784.1| Similar to ERECTA receptor protein kinase gb|U47029 from A. thaliana [Arabidopsis thaliana] gb|ACN59266 0.0
FL-Next: tr=At1g67510; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable inactive leucine-rich repeat receptor-like protein kinase at1g66830-like 0.0
Complete
biog2_v2.0_unigene952 biogeco2 v2.0 605
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog2_v2.0_unigene1604 biogeco2 v2.0 376
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM43_MARPO 0.0
Blast2go: probably inactive leucine-rich repeat receptor-like protein kinase at3g28040-like 0.0
unknown
biog2_v2.0_unigene1966 biogeco2 v2.0 675
AutoFact: root uracil permease 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleobase-ascorbate transporter 6-like 0.0
Internal
biog2_v2.0_unigene2027 biogeco2 v2.0 327
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
C-terminus
biog2_v2.0_unigene2153 biogeco2 v2.0 732
AutoFact: putative leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FII5.1|TDR_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase TDR; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM; AltName: Full=Tracheary elemen 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase pxl2-like 0.0
Internal
biog2_v2.0_unigene2249 biogeco2 v2.0 1448
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Internal
biog2_v2.0_unigene2458 biogeco2 v2.0 1241
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor-like protein kinase 0.0
C-terminus
biog2_v2.0_unigene2597 biogeco2 v2.0 972
AutoFact: O-acetyltransferase-like protein [Arabidopsis thaliana] ref|NP_001031478.1| O-acetyltransferase-like protein [Arabidopsis thaliana] gb|AAU05470.1| At2g34410 [Arabidopsis thaliana] gb|AAV59284.1| At2g34410 [Arabidopsis thaliana] dbj|BAD94920.1| hypothetica 0.0
FL-Next: tr=O-acetyltransferase family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: o-acetyltransferase-like protein 0.0
C-terminus
biog2_v2.0_unigene2618 biogeco2 v2.0 2254
AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: subtilisin-like protease-like 0.0
Complete
biog2_v2.0_unigene3380 biogeco2 v2.0 434
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
biog2_v2.0_unigene3573 biogeco2 v2.0 458
AutoFact: nudix hydrolase 3 [Arabidopsis thaliana] sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3 gb|AAM53332.1| unknown protein [Arabidopsis thaliana] gb|AAN15461.1| unknown protein [Arabidopsis thaliana] gb|AEE36287.1| nudix hydrolase 3 [A 0.0
FL-Next: sp=Nudix hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nudix hydrolase 3-like 0.0
C-terminus
biog2_v2.0_unigene3600 biogeco2 v2.0 1273
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Blast2go: 4-coumarate: ligase 0.0
C-terminus
biog2_v2.0_unigene3607 biogeco2 v2.0 260
AutoFact: nucleobase-ascorbate transporter 12 [Arabidopsis thaliana] sp|Q3E7D0.3|NAT12_ARATH RecName: Full=Nucleobase-ascorbate transporter 12; Short=AtNAT12 gb|AAM20397.1| putative membrane transporter [Arabidopsis thaliana] gb|AAN72132.1| putative membrane transp 0.0
Blast2go: nucleobase ascorbate transporter 0.0
unknown
biog2_v2.0_unigene3878 biogeco2 v2.0 302
AutoFact: O-acetyltransferase-like protein [Arabidopsis thaliana] ref|NP_001031478.1| O-acetyltransferase-like protein [Arabidopsis thaliana] gb|AAU05470.1| At2g34410 [Arabidopsis thaliana] gb|AAV59284.1| At2g34410 [Arabidopsis thaliana] dbj|BAD94920.1| hypothetica 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: o-acetyltransferase-like protein 0.0
Internal
biog2_v2.0_unigene3894 biogeco2 v2.0 426
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: opc-8:0 ligase1 0.0
N-terminus
biog2_v2.0_unigene4004 biogeco2 v2.0 397
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dioxygenase-like protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain