Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13184 biogeco2 v2.0 228
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Blast2go: 4-coumarate: ligase 0.0
N-terminus
biog2_v2.0_unigene13756 biogeco2 v2.0 242
AutoFact: WS00722.B21_A05 WS-PS-N-A-8 Picea glauca cDNA clone WS00722_A05 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene13808 biogeco2 v2.0 518
AutoFact: LRR receptor-like protein kinase (Fragment) n=3 Tax=Pseudotsuga RepID=C6F817_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like protein kinase 0.0
Internal
biog2_v2.0_unigene14475 biogeco2 v2.0 412
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog2_v2.0_unigene14567 biogeco2 v2.0 603
AutoFact: nudix hydrolase 3 [Arabidopsis thaliana] sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3 gb|AAM53332.1| unknown protein [Arabidopsis thaliana] gb|AAN15461.1| unknown protein [Arabidopsis thaliana] gb|AEE36287.1| nudix hydrolase 3 [A 0.0
FL-Next: sp=Nudix hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nudix hydrolase 3-like 0.0
Internal
biog2_v2.0_unigene14978 biogeco2 v2.0 649
AutoFact: receptor protein kinase, putative [Arabidopsis thaliana] 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g56130-like 4.2838e-36
Internal
biog2_v2.0_unigene15126 biogeco2 v2.0 534
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
Internal
biog2_v2.0_unigene15143 biogeco2 v2.0 422
AutoFact: leucine-rich repeat-like protein [Arabidopsis thaliana] gb|AAG52300.1|AC011020_7 putative receptor protein kinase [Arabidopsis thaliana] gb|AAC18784.1| Similar to ERECTA receptor protein kinase gb|U47029 from A. thaliana [Arabidopsis thaliana] gb|ACN59266 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable inactive leucine-rich repeat receptor-like protein kinase at1g66830-like 0.0
Internal
biog2_v2.0_unigene15545 biogeco2 v2.0 282
AutoFact: putative leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FII5.1|TDR_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase TDR; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM; AltName: Full=Tracheary elemen 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase pxl2-like 0.0
Internal
biog2_v2.0_unigene15640 biogeco2 v2.0 314
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter b family member 19-like 0.0
C-terminus
biog2_v2.0_unigene15692 biogeco2 v2.0 378
AutoFact: SAND family protein [Arabidopsis thaliana] gb|AAL10492.1| At2g28390/T1B3.9 [Arabidopsis thaliana] gb|AAD20687.2| expressed protein [Arabidopsis thaliana] gb|AAM91354.1| At2g28390/T1B3.9 [Arabidopsis thaliana] dbj|BAC42668.1| unknown protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sand family protein 0.0
Internal
biog2_v2.0_unigene15724 biogeco2 v2.0 400
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AAG28814.1|AC079374_17 unknown protein [Arabidopsis thaliana] gb|AAL08297.1| At1g25320/F4F7_17 [Arabidopsis thaliana] gb|AAQ65094.1| At1g25320/F4F7_17 [Arabidopsis thaliana] gb|ACN5 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable inactive leucine-rich repeat receptor-like protein kinase at1g66830-like 0.0
Internal
biog2_v2.0_unigene15808 biogeco2 v2.0 701
AutoFact: 4-coumarate:coenzyme A ligase 1 n=4 Tax=Funariaceae RepID=B7SB99_PHYPA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Blast2go: 4-coumarate: ligase 0.0
Internal
biog2_v2.0_unigene15830 biogeco2 v2.0 316
AutoFact: GDA1/CD39 nucleoside phosphatase-like protein [Arabidopsis thaliana] gb|AAC32915.2| putative nucleoside triphosphatase [Arabidopsis thaliana] gb|AEC05650.1| GDA1/CD39 nucleoside phosphatase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Adenosine diphosphatase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ectonucleoside triphosphate diphosphohydrolase 1-like isoform 1 0.0
C-terminus
biog2_v2.0_unigene16063 biogeco2 v2.0 358
AutoFact: Auxin influx carrier component n=3 Tax=Populus RepID=B9HSQ8_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aux1-like permease 0.0
Internal
biog2_v2.0_unigene16176 biogeco2 v2.0 365
AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase rch1-like 0.0
Putative coding
biog2_v2.0_unigene16387 biogeco2 v2.0 314
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
unknown
biog2_v2.0_unigene16936 biogeco2 v2.0 388
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog2_v2.0_unigene17023 biogeco2 v2.0 385
AutoFact: nucleobase-ascorbate transporter 12 [Arabidopsis thaliana] sp|Q3E7D0.3|NAT12_ARATH RecName: Full=Nucleobase-ascorbate transporter 12; Short=AtNAT12 gb|AAM20397.1| putative membrane transporter [Arabidopsis thaliana] gb|AAN72132.1| putative membrane transp 0.0
Blast2go: nucleobase ascorbate transporter 0.0
Coding
biog2_v2.0_unigene17114 biogeco2 v2.0 245
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: 4-coumarate: ligase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain