Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13208 biogeco2 v2.0 359
AutoFact: DNA repair and recombination protein radB, putative n=1 Tax=Ricinus communis RepID=B9SYN5_RICCO 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein rad51-like 4 0.0
C-terminus
biog2_v2.0_unigene13438 biogeco2 v2.0 252
AutoFact: Eukaryotic initiation factor iso4G n=1 Tax=Carica papaya RepID=E3V0I0_CARPA 0.0
Blast2go: eukaryotic translation initiation factor 4 gamma 0.0
unknown
biog2_v2.0_unigene13479 biogeco2 v2.0 331
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.79717e-30
N-terminus
biog2_v2.0_unigene13546 biogeco2 v2.0 370
AutoFact: Diacylglycerol kinase, alpha, putative n=1 Tax=Ricinus communis RepID=B9T0H8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: diacylglycerol kinase 0.0
Internal
biog2_v2.0_unigene13598 biogeco2 v2.0 628
AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 0.0
N-terminus
biog2_v2.0_unigene13926 biogeco2 v2.0 367
AutoFact: Carbohydrate kinase, PfkB [Medicago truncatula] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene13953 biogeco2 v2.0 420
AutoFact: 50S ribosomal protein L7/L12, putative n=1 Tax=Ricinus communis RepID=B9RB19_RICCO 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l12 atp-dependent clp protease adaptor protein 1.33824e-42
C-terminus
biog2_v2.0_unigene14173 biogeco2 v2.0 397
AutoFact: BY-2 kinesin-like protein 10 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein kif2a-like 0.0
Internal
biog2_v2.0_unigene14476 biogeco2 v2.0 160
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 6.9612e-35
unknown
biog2_v2.0_unigene14520 biogeco2 v2.0 358
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
Blast2go: pentatricopeptide repeat protein 0.0
unknown
biog2_v2.0_unigene14562 biogeco2 v2.0 339
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene14638 biogeco2 v2.0 365
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53700, chloroplastic; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 40; Flags: Precursor emb|CAB 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene14703 biogeco2 v2.0 284
AutoFact: metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] gb|AAR24228.1| At1g30300 [Arabidopsis thaliana] gb|AAR92355.1| At1g30300 [Arabidopsis thaliana] gb|AEE31204.1| metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] 1.4013e-45
Blast2go: hydrolase-like protein 0.0
Putative coding
biog2_v2.0_unigene14774 biogeco2 v2.0 415
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400 gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana] gb|AEE34095.1| pentatricopeptide repea 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog2_v2.0_unigene14814 biogeco2 v2.0 177
AutoFact: DNA-binding protein [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene15068 biogeco2 v2.0 247
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15630, mitochondrial; Flags: Precursor gb|AAD17407.1| putative salt-inducible protein [Arabidopsis tha 9.0e-29
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g15630, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.4804e-41
Putative C-terminus
biog2_v2.0_unigene15129 biogeco2 v2.0 334
AutoFact: putative zinc dependent protease [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15201 biogeco2 v2.0 354
AutoFact: DNA-damage-inducible protein f, putative n=1 Tax=Ricinus communis RepID=B9SIJ1_RICCO 0.0
FL-Next: sp=MATE efflux family protein 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mate efflux family protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene15312 biogeco2 v2.0 465
AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q67XX3.1|FB252_ARATH RecName: Full=F-box protein At5g06550 dbj|BAD43165.1| putative protein [Arabidopsis thaliana] dbj|BAD44458.1| putative protein [Arabidopsis thaliana] gb|AED91033.1| uncharacterized pro 0.0
FL-Next: Isoform 2 of F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 0.0
Blast2go: f-box protein at5g06550-like 0.0
Putative C-terminus
biog2_v2.0_unigene15364 biogeco2 v2.0 535
AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: alpha-amylase isozyme 3d 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain