Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene10940 biogeco2 v2.0 168
AutoFact: Unassigned protein
Blast2go: pentatricopeptide repeat protein 7.37555e-26
unknown
biog2_v2.0_unigene11073 biogeco2 v2.0 299
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene11172 biogeco2 v2.0 554
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EEE56247.1| hypothetical protein OsJ_05263 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At4g21880, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog2_v2.0_unigene11188 biogeco2 v2.0 214
AutoFact: pentatricopeptide repeat protein-like protein [Hyacinthus orientalis] 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
Putative C-terminus
biog2_v2.0_unigene11202 biogeco2 v2.0 168
AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 0.0
Internal
biog2_v2.0_unigene11244 biogeco2 v2.0 111
AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AAF87863.1|AC022520_7 similar to cdc2 protein kinase [Arabidopsis thaliana] gb|AEE32884.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable serine/threonine-protein kinase At1g54610; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal
biog2_v2.0_unigene11300 biogeco2 v2.0 351
AutoFact: trichome birefringence-like 13 protein [Arabidopsis thaliana] gb|AAD15463.1| hypothetical protein [Arabidopsis thaliana] gb|AAL75895.1| At2g14530/T13P21.9 [Arabidopsis thaliana] gb|AAM70553.1| At2g14530/T13P21.9 [Arabidopsis thaliana] gb|AEC06309.1| trich 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene11312 biogeco2 v2.0 217
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [Arabido 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
biog2_v2.0_unigene11341 biogeco2 v2.0 317
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FME4.1|PP438_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g60960, mitochondrial; Flags: Precursor dbj|BAB10645.1| unnamed protein product [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene11442 biogeco2 v2.0 468
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene11624 biogeco2 v2.0 285
AutoFact: CBL-interacting protein kinase 3 n=8 Tax=rosids RepID=A0MNJ1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cbl-interacting serine threonine-protein 0.0
N-terminus
biog2_v2.0_unigene11784 biogeco2 v2.0 270
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R809_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Putative N-terminus
biog2_v2.0_unigene11844 biogeco2 v2.0 591
AutoFact: Pentatricopeptide-containing protein (Fragment) n=3 Tax=Pseudotsuga RepID=C6F9Z2_PSEMZ 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene11872 biogeco2 v2.0 381
AutoFact: Metallothio multi-domain protein 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
biog2_v2.0_unigene11891 biogeco2 v2.0 330
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
biog2_v2.0_unigene11892 biogeco2 v2.0 403
AutoFact: kinesin like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Kinesin-like protein FLA10; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: kinesin-like protein 0.0
Internal
biog2_v2.0_unigene11950 biogeco2 v2.0 505
AutoFact: ubiquitin-like modifier-activating enzyme atg7 [Arabidopsis thaliana] sp|Q94CD5.1|ATG7_ARATH RecName: Full=Ubiquitin-like modifier-activating enzyme atg7; AltName: Full=ATG12-activating enzyme E1 atg7; AltName: Full=Autophagy-related protein 7; Short=AtAP 0.0
FL-Next: sp=Ubiquitin-like modifier-activating enzyme atg7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-like modifier-activating enzyme atg7-like 0.0
Internal
biog2_v2.0_unigene12060 biogeco2 v2.0 245
AutoFact: kinesin family member 4/7/21/27 [Arabidopsis thaliana] gb|AED97398.1| kinesin family member 4/7/21/27 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: chromosome-associated kinesin kif4-like 0.0
Internal
biog2_v2.0_unigene12073 biogeco2 v2.0 481
AutoFact: MtN3_slv domain containing protein 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bidirectional sugar transporter sweet4-like 0.0
Putative C-terminus
biog2_v2.0_unigene12114 biogeco2 v2.0 279
AutoFact: COPZ2; Zeta2-COP 5.0e-14
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain