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Assembly Name: biogeco2 v2.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene5915 biogeco2 v2.0 324
AutoFact: Cytochrome c oxidase subunit 2 n=1 Tax=Beta vulgaris subsp. maritima RepID=E6ZDW9_BETMR 0.0
Blast2go: cytochrome c oxidase subunit 2 0.0
Putative coding
biog2_v2.0_unigene6197 biogeco2 v2.0 192
AutoFact: Cytochrome c oxidase subunit 2 (Fragment) n=2 Tax=Magnoliophyta RepID=B5LYM7_ESCCA 2.0e-09
Blast2go: cytochrome c oxidase subunit 2 8.20941e-13
unknown
biog2_v2.0_unigene7212 biogeco2 v2.0 648
AutoFact: Gb|AAF30301.1 n=3 Tax=Arabidopsis RepID=Q9LHL6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene7359 biogeco2 v2.0 672
AutoFact: Neutral alpha-glucosidase ab, putative n=1 Tax=Ricinus communis RepID=B9STU2_RICCO 0.0
FL-Next: tr=Alpha-glucosidase; Solanum tuberosum (Potato). Plasmid pMal1. 0.0
Blast2go: neutral alpha-glucosidase ab 0.0
N-terminus
biog2_v2.0_unigene7427 biogeco2 v2.0 548
AutoFact: cysteine proteinase-like protein [Arabidopsis thaliana] gb|AAF14829.1|AC011664_11 unknown protein [Arabidopsis thaliana] gb|AAS76700.1| At3g02070 [Arabidopsis thaliana] gb|AAS92324.1| At3g02070 [Arabidopsis thaliana] dbj|BAH20151.1| AT3G02070 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: otu domain-containing protein ddb_g0284757-like 0.0
Putative C-terminus
biog2_v2.0_unigene7579 biogeco2 v2.0 659
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
unknown
biog2_v2.0_unigene7746 biogeco2 v2.0 654
AutoFact: Eukaryotic release factor 1 (ERF1) family protein n=2 Tax=Arabidopsis RepID=Q9ZT87_ARATH 0.0
FL-Next: tr=AT4g27650; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: eukaryotic release factor 1 family protein 0.0
N-terminus
biog2_v2.0_unigene7793 biogeco2 v2.0 698
AutoFact: golgin candidate 1 [Arabidopsis thaliana] sp|Q8S8N9.2|GOGC1_ARATH RecName: Full=Golgin candidate 1; Short=AtGC1; AltName: Full=Golgin-84 gb|AAS49041.1| At2g19950 [Arabidopsis thaliana] dbj|BAF01318.1| hypothetical protein [Arabidopsis thaliana] gb|AEC0694 0.0
FL-Next: sp=Golgin candidate 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: golgin candidate 1 0.0
C-terminus
biog2_v2.0_unigene7807 biogeco2 v2.0 425
AutoFact: guanine nucleotide-exchange-like protein [Arabidopsis thaliana] 0.0
Blast2go: brefeldin a-inhibited guanine nucleotide-exchange protein 1-like 0.0
unknown
biog2_v2.0_unigene7927 biogeco2 v2.0 386
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
biog2_v2.0_unigene7950 biogeco2 v2.0 582
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ac034256_12est gb 0.0
C-terminus
biog2_v2.0_unigene8053 biogeco2 v2.0 618
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene8078 biogeco2 v2.0 614
AutoFact: Sphingosine kinase n=1 Tax=Lotus japonicus RepID=Q5KR50_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sphingoid long-chain bases kinase 1 0.0
C-terminus
biog2_v2.0_unigene8201 biogeco2 v2.0 680
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase i 0.0
Internal
biog2_v2.0_unigene8224 biogeco2 v2.0 459
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: histone-arginine methyltransferase carm1 0.0
Putative N-terminus
biog2_v2.0_unigene8233 biogeco2 v2.0 565
AutoFact: OTU-like cysteine protease family protein [Arabidopsis thaliana] ref|NP_001119168.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] gb|AAM64524.1| unknown [Arabidopsis thaliana] dbj|BAD95211.1| hypothetical protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine-type peptidase 0.0
Putative N-terminus
biog2_v2.0_unigene8238 biogeco2 v2.0 534
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5 -3 exoribonuclease 3-like 0.0
C-terminus
biog2_v2.0_unigene8334 biogeco2 v2.0 410
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
C-terminus
biog2_v2.0_unigene8343 biogeco2 v2.0 515
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
Internal
biog2_v2.0_unigene8397 biogeco2 v2.0 376
AutoFact: PREDICTED: similar to Callose synthase 10 n=1 Tax=Vitis vinifera RepID=UPI0001985174 2.00386e-43
FL-Next: sp=Callose synthase 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 10 4.09179e-43
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain