Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene494 biogeco2 v2.0 407
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Internal
biog2_v2.0_unigene652 biogeco2 v2.0 701
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Putative Complete
biog2_v2.0_unigene1382 biogeco2 v2.0 353
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 9 0.0
C-terminus
biog2_v2.0_unigene1922 biogeco2 v2.0 885
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein 0.0
N-terminus
biog2_v2.0_unigene2405 biogeco2 v2.0 398
AutoFact: MADS-box transcription factor 31 n=3 Tax=Andropogoneae RepID=B6TW19_MAIZE 2.0e-17
FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: mads-box protein jointless-like 4.14309e-22
N-terminus
biog2_v2.0_unigene4078 biogeco2 v2.0 1313
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Putative Complete
biog2_v2.0_unigene4197 biogeco2 v2.0 741
AutoFact: Putative MADS box transcription factor PrMADS5 n=1 Tax=Pinus radiata RepID=O24489_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS5; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein soc1-like 0.0
N-terminus
biog2_v2.0_unigene4379 biogeco2 v2.0 210
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
Blast2go: mads-box protein 0.0
unknown
biog2_v2.0_unigene4594 biogeco2 v2.0 1025
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein svp 0.0
Complete
biog2_v2.0_unigene5865 biogeco2 v2.0 381
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 0.0
C-terminus
biog2_v2.0_unigene5958 biogeco2 v2.0 542
AutoFact: putative MADS box transcription factor PrMADS5 [Pinus radiata] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dal3 protein 0.0
N-terminus
biog2_v2.0_unigene9994 biogeco2 v2.0 146
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 0.0
Internal
biog2_v2.0_unigene10822 biogeco2 v2.0 206
AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 6.0e-23
Blast2go: dal3 protein 3.45172e-28
unknown
biog2_v2.0_unigene10980 biogeco2 v2.0 358
AutoFact: putative MADS-box protein [Cucumis sativus] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mikcc mads-domain protein -s 2.92316e-39
N-terminus
biog2_v2.0_unigene11643 biogeco2 v2.0 468
AutoFact: MIKCC MADS-domain protein PPMC6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDM3_PHYPA 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mikcc mads-domain protein ppmc6 0.0
Putative N-terminus
biog2_v2.0_unigene11676 biogeco2 v2.0 195
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
Blast2go: mads box transcription factor 9 0.0
unknown
biog2_v2.0_unigene12115 biogeco2 v2.0 277
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
C-terminus
biog2_v2.0_unigene12414 biogeco2 v2.0 267
AutoFact: MADS box protein n=6 Tax=Cucurbitaceae RepID=C5IS80_CUCSA 1.0e-20
Blast2go: mads box protein 0.0
unknown
biog2_v2.0_unigene12691 biogeco2 v2.0 120
AutoFact: MADS-box protein TM3 subfamily (Fragment) n=1 Tax=Coffea arabica RepID=E9JTV7_COFAR 2.0e-05
Blast2go: unknown [Picea sitchensis] 4.3218e-14
unknown
biog2_v2.0_unigene13282 biogeco2 v2.0 562
AutoFact: MADS-domain protein DAL10 n=1 Tax=Picea abies RepID=Q71UQ7_PICAB 0.0
FL-Next: tr=MADS-domain protein DAL10; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: mads-domain transcription factor 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain