Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Transcription factor, MADS-box

Term: IPR002100  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13432 biogeco2 v2.0 250
AutoFact: MADS-box protein TM3 subfamily (Fragment) n=1 Tax=Coffea arabica RepID=E9JTV7_COFAR 2.0e-05
Blast2go: unknown [Picea sitchensis] 4.3218e-14
unknown
biog2_v2.0_unigene13640 biogeco2 v2.0 307
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Putative C-terminus
biog2_v2.0_unigene13797 biogeco2 v2.0 343
AutoFact: putative MADS-box family transcription factor [Pinus radiata] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box protein 0.0
C-terminus
biog2_v2.0_unigene13971 biogeco2 v2.0 385
AutoFact: MADS box protein n=6 Tax=Cucurbitaceae RepID=C5IS80_CUCSA 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box protein 0.0
Putative N-terminus
biog2_v2.0_unigene16098 biogeco2 v2.0 394
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene16524 biogeco2 v2.0 324
AutoFact: Truncated MADS-box transcription factor (Fragment) n=3 Tax=Pinaceae RepID=C6F9J9_PSEMZ 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: truncated mads-box transcription factor 5.60606e-39
N-terminus
biog2_v2.0_unigene16917 biogeco2 v2.0 413
AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box transcription factor 3 0.0
C-terminus
biog2_v2.0_unigene17442 biogeco2 v2.0 180
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Internal
biog2_v2.0_unigene17538 biogeco2 v2.0 443
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 2.0e-27
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 6 3.02842e-27
C-terminus
biog2_v2.0_unigene17902 biogeco2 v2.0 624
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Complete
biog2_v2.0_unigene18142 biogeco2 v2.0 611
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 6 0.0
C-terminus
biog2_v2.0_unigene18360 biogeco2 v2.0 431
AutoFact: putative MADS-domain transcription factor DEFH7 [Antirrhinum majus] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein 0.0
N-terminus
biog2_v2.0_unigene19117 biogeco2 v2.0 298
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein 0.0
C-terminus
biog2_v2.0_unigene19274 biogeco2 v2.0 278
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 9 0.0
N-terminus
biog2_v2.0_unigene19356 biogeco2 v2.0 152
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain