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Assembly Name: biogeco2 v2.0

Name: Zinc finger, SWIM-type

Term: IPR007527  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene504 biogeco2 v2.0 665
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: zinc ion binding protein 9.78607e-28
Internal
biog2_v2.0_unigene592 biogeco2 v2.0 746
AutoFact: Electron transporter, putative n=1 Tax=Ricinus communis RepID=B9SPX9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog2_v2.0_unigene1518 biogeco2 v2.0 642
AutoFact: Electron transporter, putative n=1 Tax=Ricinus communis RepID=B9SPX9_RICCO 0.0
Blast2go: uncharacterized protein 0.0
unknown
biog2_v2.0_unigene1577 biogeco2 v2.0 381
AutoFact: SWIM zinc finger-like protein [Arabidopsis thaliana] gb|AAL91647.1| At1g60560/F8A5_10 [Arabidopsis thaliana] gb|AAO11540.1| At1g60560/F8A5_10 [Arabidopsis thaliana] gb|AEE33698.1| SWIM zinc finger-like protein [Arabidopsis thaliana] 0.0
Blast2go: swim zinc finger-like protein 0.0
unknown
biog2_v2.0_unigene4122 biogeco2 v2.0 717
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
biog2_v2.0_unigene4929 biogeco2 v2.0 743
AutoFact: galactokinase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactose kinase 0.0
C-terminus
biog2_v2.0_unigene7438 biogeco2 v2.0 556
AutoFact: galactokinase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactose kinase 0.0
N-terminus
biog2_v2.0_unigene7518 biogeco2 v2.0 882
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] sp|Q8W486.1|Y1491_ARATH RecName: Full=DUF246 domain-containing protein At1g04910 gb|AAL32840.1| Similar to auxin-independent growth promoter (axi 1) [Arabidopsis thaliana] gb|AAP68319.1| At1g04910 [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
C-terminus
biog2_v2.0_unigene8346 biogeco2 v2.0 810
AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Os03g0214100 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 0.0
Internal
biog2_v2.0_unigene8581 biogeco2 v2.0 472
AutoFact: Pleckstrin homology (PH) domain-containing protein [Arabidopsis thaliana] gb|AAL50066.1| At2g30880/F7F1.9 [Arabidopsis thaliana] gb|AAN28904.1| At2g30880/F7F1.9 [Arabidopsis thaliana] gb|AEC08451.1| Pleckstrin homology (PH) domain-containing protein [Arab 0.0
Blast2go: ph domain containing protein 0.0
Coding
biog2_v2.0_unigene8734 biogeco2 v2.0 355
AutoFact: Unassigned protein
Blast2go: uncharacterized protein 0.0
unknown
biog2_v2.0_unigene9458 biogeco2 v2.0 366
AutoFact: Pleckstrin homology (PH) domain-containing protein [Arabidopsis thaliana] gb|AAL50066.1| At2g30880/F7F1.9 [Arabidopsis thaliana] gb|AAN28904.1| At2g30880/F7F1.9 [Arabidopsis thaliana] gb|AEC08451.1| Pleckstrin homology (PH) domain-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ph domain containing protein 0.0
Internal
biog2_v2.0_unigene9527 biogeco2 v2.0 419
AutoFact: Unassigned protein
Blast2go: zinc finger swim domain-containing protein 0.0
unknown
biog2_v2.0_unigene9946 biogeco2 v2.0 348
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon gag protein 1.13055e-34
Internal
biog2_v2.0_unigene10996 biogeco2 v2.0 206
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: far1-related protein 0.0
Internal
biog2_v2.0_unigene11036 biogeco2 v2.0 232
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: far1-related protein 0.0
Internal
biog2_v2.0_unigene11196 biogeco2 v2.0 354
AutoFact: Unassigned protein
Blast2go: far1-related protein 0.0
Putative coding
biog2_v2.0_unigene11335 biogeco2 v2.0 134
AutoFact: galactokinase [Pisum sativum] 0.0
FL-Next: sp=Galactokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: galactose kinase 0.0
Internal
biog2_v2.0_unigene11712 biogeco2 v2.0 97
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
Blast2go: gag-pol polyprotein 0.0
unknown
biog2_v2.0_unigene12771 biogeco2 v2.0 238
AutoFact: Unassigned protein
Blast2go: far1-related protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain