Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Zinc finger, SWIM-type

Term: IPR007527  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene12774 biogeco2 v2.0 313
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 0.0
Blast2go: retrotransposon unclassified 0.0
Coding
biog2_v2.0_unigene14073 biogeco2 v2.0 347
AutoFact: SWIM zinc finger-like protein [Arabidopsis thaliana] gb|AAL91647.1| At1g60560/F8A5_10 [Arabidopsis thaliana] gb|AAO11540.1| At1g60560/F8A5_10 [Arabidopsis thaliana] gb|AEE33698.1| SWIM zinc finger-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swim zinc finger-like protein 0.0
Internal
biog2_v2.0_unigene14953 biogeco2 v2.0 330
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: zinc ion binding protein 2.73129e-24
Internal
biog2_v2.0_unigene15718 biogeco2 v2.0 400
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog2_v2.0_unigene16509 biogeco2 v2.0 478
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
biog2_v2.0_unigene16844 biogeco2 v2.0 398
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAH20174.1| AT5G10490 [Arabidopsis thaliana] gb|AED91552.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
Blast2go: mscs-like 2 protein 0.0
Coding
biog2_v2.0_unigene16964 biogeco2 v2.0 529
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc ion binding protein 0.0
Internal
biog2_v2.0_unigene17723 biogeco2 v2.0 490
AutoFact: Electron transporter, putative n=1 Tax=Ricinus communis RepID=B9SPX9_RICCO 0.0
Blast2go: uncharacterized protein 0.0
Putative coding
biog2_v2.0_unigene17853 biogeco2 v2.0 461
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding protein 9.78607e-28
N-terminus
biog2_v2.0_unigene18688 biogeco2 v2.0 554
AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bidirectional sugar transporter sweet1-like 0.0
Putative C-terminus
biog2_v2.0_unigene19074 biogeco2 v2.0 683
AutoFact: UDP-glucose dehydrogenase n=3 Tax=Oryza sativa RepID=Q75GS4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp-glucose dehydrogenase 0.0
C-terminus
biog2_v2.0_unigene19469 biogeco2 v2.0 338
AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bidirectional sugar transporter sweet1-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain