Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
biog2_v2.0_unigene288
|
biogeco2 v2.0
|
417
|
• AutoFact: putative small nuclear ribonucleoprotein D1 [Brassica napus]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: small nuclear ribonucleoprotein sm d1
|
0.0
|
|
Putative Complete
|
biog2_v2.0_unigene916
|
biogeco2 v2.0
|
851
|
• AutoFact: U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana] ref|NP_001031238.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana] gb|AAL50104.1| At1g65700/F1E22_3 [Arabidopsis thaliana] gb|AAM16215.1| At1g65700/F1E22_3 [Arabidopsis thali
|
1.0e-28
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: u6 snrna-associated sm-like protein lsm8
|
0.0
|
|
Complete
|
biog2_v2.0_unigene1391
|
biogeco2 v2.0
|
1487
|
• AutoFact: BTB/POZ and M2 domain-containing protein [Arabidopsis thaliana] sp|Q9M8J9.1|BPM2_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 2; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 2; Short=AtBPM2 gb|AAF30312.1|AC018907_12 unknown protein [Ara
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: btb poz and math domain-containing protein 2-like
|
0.0
|
|
Complete
|
biog2_v2.0_unigene1439
|
biogeco2 v2.0
|
310
|
• AutoFact: BTB-POZ and math domain-containing protein [Arabidopsis thaliana] sp|Q8L765.1|BPM1_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 1; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 1; Short=AtBPM1 gb|AAM97116.1| putative protein [Arabidopsis
|
0.0
|
• Blast2go: protein
|
0.0
|
|
unknown
|
biog2_v2.0_unigene1664
|
biogeco2 v2.0
|
592
|
• AutoFact: Sm-like protein [Arabidopsis thaliana]
|
2.0e-37
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: protein
|
0.0
|
|
Complete
|
biog2_v2.0_unigene1732
|
biogeco2 v2.0
|
745
|
• AutoFact: U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana] ref|NP_850580.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana] gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana] gb|AAO22620.1| putative Sm protein [Arabidopsis tha
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: u6 snrna-associated sm-like protein lsm1
|
0.0
|
|
Complete
|
biog2_v2.0_unigene1919
|
biogeco2 v2.0
|
444
|
• AutoFact: Vacuolar protein sorting factor 4B-like n=4 Tax=Poaceae RepID=Q5QMP6_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: katanin p60 atpase-containing subunit a-like 2-like
|
0.0
|
|
Internal
|
biog2_v2.0_unigene2230
|
biogeco2 v2.0
|
1078
|
• AutoFact: U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana] ref|NP_849931.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana] gb|AAD24820.1| putative snRNP splicing factor [Arabidopsis thaliana] gb|AAO23652.1| At2g03870 [Arabidopsis tha
|
3.00018e-42
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: u6 snrna-associated sm-like protein lsm7-like
|
0.0
|
|
Complete
|
biog2_v2.0_unigene2237
|
biogeco2 v2.0
|
983
|
• AutoFact: small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_973710.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_001078331.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] emb|CAB83134.1| small nuclear ribonucleoprot
|
1.4013e-45
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: small nuclear ribonucleoprotein d2
|
0.0
|
|
Complete
|
biog2_v2.0_unigene2287
|
biogeco2 v2.0
|
773
|
• AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean).
|
0.0
|
|
Internal
|
biog2_v2.0_unigene2604
|
biogeco2 v2.0
|
1259
|
• AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Complete
|
biog2_v2.0_unigene3136
|
biogeco2 v2.0
|
797
|
• AutoFact: U6 snRNA-associated Sm-like protein [Arabidopsis thaliana] gb|AAF81363.1|AC036104_12 Contains similarity to Lsm3 protein from Homo sapiens gb|AJ238095 and contains a conserved Sm protein PF|01423 motif. EST gb|AI998441 comes from this gene [Arabidopsis th
|
3.00004e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: u6 snrna-associated sm-like protein lsm3
|
0.0
|
|
Complete
|
biog2_v2.0_unigene3789
|
biogeco2 v2.0
|
415
|
• AutoFact: Putative snRNP core protein SMX5d n=1 Tax=Oryza sativa Japonica Group RepID=Q7F193_ORYSJ
|
1.0e-38
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: snrnp core sm protein sm-x5-like protein
|
0.0
|
|
Complete
|
biog2_v2.0_unigene4371
|
biogeco2 v2.0
|
811
|
• AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
biog2_v2.0_unigene4641
|
biogeco2 v2.0
|
1078
|
• AutoFact: Small nuclear ribonucleoprotein family protein [Arabidopsis thaliana] gb|AEE84034.1| Small nuclear ribonucleoprotein family protein [Arabidopsis thaliana]
|
1.0e-20
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: small nuclear ribonucleoprotein-associated protein b
|
4.34403e-44
|
|
Complete
|
biog2_v2.0_unigene4965
|
biogeco2 v2.0
|
877
|
• AutoFact: small nuclear ribonucleoprotein F [Arabidopsis thaliana] ref|XP_002867361.1| hypothetical protein ARALYDRAFT_913456 [Arabidopsis lyrata subsp. lyrata] ref|XP_002885912.1| hypothetical protein ARALYDRAFT_899645 [Arabidopsis lyrata subsp. lyrata] sp|Q9SUM2.
|
5.0e-37
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: small nuclear ribonucleoprotein f
|
0.0
|
|
Complete
|
biog2_v2.0_unigene4987
|
biogeco2 v2.0
|
907
|
• AutoFact: small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: small nuclear ribonucleoprotein sm d3
|
0.0
|
|
Complete
|
biog2_v2.0_unigene5375
|
biogeco2 v2.0
|
620
|
• AutoFact: Like-Sm ribonucleoprotein-related, core [Medicago truncatula]
|
2.0e-32
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: small nuclear ribonucleoprotein g
|
1.4013e-45
|
|
Complete
|
biog2_v2.0_unigene5733
|
biogeco2 v2.0
|
407
|
• AutoFact: putative small nuclear ribonucleoprotein [Arabidopsis thaliana] ref|XP_002886267.1| hypothetical protein ARALYDRAFT_900374 [Arabidopsis lyrata subsp. lyrata] gb|AAD08943.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana] gb|AAM64436.1| p
|
2.0e-37
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: small nuclear ribonucleoprotein e
|
0.0
|
|
Putative Complete
|
biog2_v2.0_unigene7927
|
biogeco2 v2.0
|
386
|
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO
|
0.0
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
• Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein
|
0.0
|
|
Internal
|