Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Extracellular solute-binding protein, family 3, conserved site

Term: IPR018313  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1674 biogeco2 v2.0 619
AutoFact: Hydrophobic protein LTI6A, putative 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rare cold inducible protein 1.32923e-17
Complete
biog2_v2.0_unigene5511 biogeco2 v2.0 1008
AutoFact: emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana] gb|AAF13086.1|AC009176_13 putative coated vesicle membrane protein [Arabidopsis thaliana] gb|AAF21178.1|AC013483_2 putative coated vesicle membrane protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane emp24 domain-containing protein 0.0
Complete
biog2_v2.0_unigene5859 biogeco2 v2.0 206
AutoFact: plasma membrane protein 3 [Leymus chinensis] 9.0e-19
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 2.31004e-31
N-terminus
biog2_v2.0_unigene16844 biogeco2 v2.0 398
AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAH20174.1| AT5G10490 [Arabidopsis thaliana] gb|AED91552.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
Blast2go: mscs-like 2 protein 0.0
Coding
biog2_v2.0_unigene18808 biogeco2 v2.0 433
AutoFact: Rare cold inducible protein (Fragment) n=4 Tax=Pinaceae RepID=C6FC72_PSEMZ 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low temprature induced-like protein 3.77976e-22
Complete
biog2_v2.0_unigene19538 biogeco2 v2.0 417
AutoFact: Hydrophobic protein LTI6A, putative 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rare cold inducible protein 1.32923e-17
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain