Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Pectate lyase, N-terminal

Term: IPR007524  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene1398 biogeco2 v2.0 625
• AutoFact: pectate lyase [Prunus persica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
N-terminus
biog2_v2.0_unigene5868 biogeco2 v2.0 754
• AutoFact: pectate lyase [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
N-terminus
biog2_v2.0_unigene6098 biogeco2 v2.0 320
• AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 1.53512e-31
Internal
biog2_v2.0_unigene9252 biogeco2 v2.0 397
• AutoFact: pectate lyase [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Putative C-terminus
biog2_v2.0_unigene9915 biogeco2 v2.0 594
• AutoFact: putative pectate lyase 18 [Arabidopsis thaliana] ref|NP_001190827.1| putative pectate lyase 18 [Arabidopsis thaliana] sp|Q9C5M8.2|PEL18_ARATH RecName: Full=Probable pectate lyase 18; AltName: Full=Pectate lyase A10; Flags: Precursor gb|AAW38990.1| At4g247 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Putative C-terminus
biog2_v2.0_unigene16003 biogeco2 v2.0 192
• AutoFact: pectate lyase [Fragaria x ananassa] 0.0
• Blast2go: pectate lyase 0.0
unknown
biog2_v2.0_unigene17568 biogeco2 v2.0 176
• AutoFact: pectate lyase [Fragaria x ananassa] 0.0
• Blast2go: pectate lyase 0.0
unknown
biog2_v2.0_unigene18833 biogeco2 v2.0 480
• AutoFact: putative pectate lyase 18 [Arabidopsis thaliana] ref|NP_001190827.1| putative pectate lyase 18 [Arabidopsis thaliana] sp|Q9C5M8.2|PEL18_ARATH RecName: Full=Probable pectate lyase 18; AltName: Full=Pectate lyase A10; Flags: Precursor gb|AAW38990.1| At4g247 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Putative N-terminus
biog2_v2.0_unigene19385 biogeco2 v2.0 310
• AutoFact: Putative pectate-lyase (Fragment) n=1 Tax=Capsicum annuum RepID=Q8S345_CAPAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain