Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene5868 biogeco2 v2.0 754
• AutoFact: pectate lyase [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
N-terminus
biog2_v2.0_unigene6071 biogeco2 v2.0 1913
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Complete
biog2_v2.0_unigene6098 biogeco2 v2.0 320
• AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 1.53512e-31
Internal
biog2_v2.0_unigene7251 biogeco2 v2.0 631
• AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene8570 biogeco2 v2.0 418
• AutoFact: SNARE associated Golgi protein family [Arabidopsis thaliana] gb|AAR92258.1| At1g03260 [Arabidopsis thaliana] gb|AAS47670.1| At1g03260 [Arabidopsis thaliana] gb|AEE27551.1| SNARE associated Golgi protein family [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tvp38 tmem64 family membrane protein slr0305-like 0.0
N-terminus
biog2_v2.0_unigene8584 biogeco2 v2.0 545
• AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RCG6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable polygalacturonase-like 0.0
C-terminus
biog2_v2.0_unigene8792 biogeco2 v2.0 467
• AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pectate lyase 15 0.0
N-terminus
biog2_v2.0_unigene9037 biogeco2 v2.0 643
• AutoFact: Pectinesterase n=3 Tax=Oryza sativa RepID=B9EVS6_ORYSJ 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectinesterase ppe8b precursor 0.0
C-terminus
biog2_v2.0_unigene9053 biogeco2 v2.0 571
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
Putative N-terminus
biog2_v2.0_unigene9237 biogeco2 v2.0 412
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
Internal
biog2_v2.0_unigene9252 biogeco2 v2.0 397
• AutoFact: pectate lyase [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Putative C-terminus
biog2_v2.0_unigene9809 biogeco2 v2.0 616
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectin methylesterase 0.0
Internal
biog2_v2.0_unigene9915 biogeco2 v2.0 594
• AutoFact: putative pectate lyase 18 [Arabidopsis thaliana] ref|NP_001190827.1| putative pectate lyase 18 [Arabidopsis thaliana] sp|Q9C5M8.2|PEL18_ARATH RecName: Full=Probable pectate lyase 18; AltName: Full=Pectate lyase A10; Flags: Precursor gb|AAW38990.1| At4g247 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Putative C-terminus
biog2_v2.0_unigene10150 biogeco2 v2.0 410
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectin methylesterase 0.0
C-terminus
biog2_v2.0_unigene10229 biogeco2 v2.0 496
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectinesterase 0.0
Internal
biog2_v2.0_unigene10416 biogeco2 v2.0 555
• AutoFact: pectate lyase [Prunus persica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Internal
biog2_v2.0_unigene10559 biogeco2 v2.0 524
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9P2L6_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pectinesterase 68-like 0.0
C-terminus
biog2_v2.0_unigene11434 biogeco2 v2.0 466
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
N-terminus
biog2_v2.0_unigene12189 biogeco2 v2.0 516
• AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable pectinesterase 53-like 0.0
N-terminus
biog2_v2.0_unigene12473 biogeco2 v2.0 243
• AutoFact: pectate lyase [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain