Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Gonadotropin, beta subunit, conserved site

Term: IPR018245  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene248 biogeco2 v2.0 815
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
Complete
biog2_v2.0_unigene1291 biogeco2 v2.0 986
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 9.0e-19
FL-Next: sp=Snakin-2; Solanum tuberosum (Potato). 0.0
Blast2go: gonadotropin beta chain 4.75326e-39
Complete
biog2_v2.0_unigene1859 biogeco2 v2.0 900
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
C-terminus
biog2_v2.0_unigene1907 biogeco2 v2.0 580
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
Blast2go: cellulose synthase 0.0
unknown
biog2_v2.0_unigene2088 biogeco2 v2.0 207
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
unknown
biog2_v2.0_unigene2548 biogeco2 v2.0 630
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
Blast2go: cellulose synthase 0.0
unknown
biog2_v2.0_unigene2775 biogeco2 v2.0 1816
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Sorghum bicolor RepID=C5YW23_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Complete
biog2_v2.0_unigene4072 biogeco2 v2.0 1679
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Putative N-terminus
biog2_v2.0_unigene4614 biogeco2 v2.0 551
AutoFact: Gibberellin-regulated protein 3, putative n=1 Tax=Ricinus communis RepID=B9S2K0_RICCO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gonadotropin beta chain 7.59387e-32
Complete
biog2_v2.0_unigene5359 biogeco2 v2.0 1222
AutoFact: Cytochrome c oxidase subunit Vb n=1 Tax=Oryza sativa Japonica Group RepID=P92683_ORYSJ 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome c oxidase polypeptide vb 0.0
Complete
biog2_v2.0_unigene5496 biogeco2 v2.0 633
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-24
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline rich protein 1.12188e-28
C-terminus
biog2_v2.0_unigene5577 biogeco2 v2.0 773
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Marchantia polymorpha RepID=Q84VI8_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl- -synthase 0.0
C-terminus
biog2_v2.0_unigene6379 biogeco2 v2.0 413
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 9.0e-19
Blast2go: gonadotropin beta chain 4.75326e-39
Coding
biog2_v2.0_unigene7512 biogeco2 v2.0 477
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
N-terminus
biog2_v2.0_unigene9515 biogeco2 v2.0 431
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
biog2_v2.0_unigene9582 biogeco2 v2.0 475
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase 0.0
Putative C-terminus
biog2_v2.0_unigene9892 biogeco2 v2.0 414
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
Internal
biog2_v2.0_unigene10420 biogeco2 v2.0 636
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
Internal
biog2_v2.0_unigene11648 biogeco2 v2.0 366
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
Blast2go: cellulose synthase-like protein 0.0
unknown
biog2_v2.0_unigene12902 biogeco2 v2.0 278
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5A9Z6_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain