Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Gonadotropin, beta subunit, conserved site

Term: IPR018245  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13021 biogeco2 v2.0 328
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Coding
biog2_v2.0_unigene13081 biogeco2 v2.0 185
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
Blast2go: 3-ketoacyl- synthase 0.0
unknown
biog2_v2.0_unigene13713 biogeco2 v2.0 351
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Internal
biog2_v2.0_unigene13960 biogeco2 v2.0 176
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Internal
biog2_v2.0_unigene15040 biogeco2 v2.0 284
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-24
Blast2go: proline rich protein 1.12188e-28
Putative coding
biog2_v2.0_unigene16809 biogeco2 v2.0 340
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
biog2_v2.0_unigene16815 biogeco2 v2.0 243
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
unknown
biog2_v2.0_unigene18445 biogeco2 v2.0 434
AutoFact: Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I729_POPTR 3.0e-07
unknown
biog2_v2.0_unigene18564 biogeco2 v2.0 587
AutoFact: gibberellin-regulated protein 2 [Arabidopsis thaliana] sp|P46688.1|GASA2_ARATH RecName: Full=Gibberellin-regulated protein 2; Flags: Precursor gb|AAB06309.1| GAST1 protein homolog [Arabidopsis thaliana] emb|CAB78084.1| gibberellin-regulated protein GASA2 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin-regulated protein 1 0.0
Complete
biog2_v2.0_unigene19038 biogeco2 v2.0 542
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl- synthase 0.0
Internal
biog2_v2.0_unigene19197 biogeco2 v2.0 372
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g68530 t26j14_10 0.0
Putative C-terminus
biog2_v2.0_unigene19636 biogeco2 v2.0 424
AutoFact: cytochrome c oxidase subunit Vb [Pisum sativum] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome c oxidase subunit 5b- mitochondrial-like 1.26438e-39
C-terminus
biog2_v2.0_unigene19871 biogeco2 v2.0 306
AutoFact: gibberellin-regulated protein [Arabidopsis thaliana] gb|AAK49610.1|AF372894_1 AT5g14920/F2G14_40 [Arabidopsis thaliana] emb|CAC01811.1| putative protein [Arabidopsis thaliana] gb|AAK74054.1| AT5g14920/F2G14_40 [Arabidopsis thaliana] gb|AAL06958.1| AT5g149 2.0e-14
Blast2go: gonadotropin beta chain 2.54993e-28
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain