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Assembly Name: biogeco2 v2.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene10944 biogeco2 v2.0 385
AutoFact: CV03066X1C11.f1 CV03-normalized library Euphorbia esula cDNA clone CV03066X1C11.f1 5, mRNA sequence. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: probable inactive serine threonine-protein kinase lvsg-like 0.0
Internal
biog2_v2.0_unigene11092 biogeco2 v2.0 655
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAQ89634.1| At1g14020 [Arabidopsis thaliana] dbj|BAF01665.1| growth regulator like protein [Arabidopsis thaliana] dbj|BAF01818.1| growth regulator like protein [Arabidopsis thaliana] gb|AEE2909 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
biog2_v2.0_unigene11205 biogeco2 v2.0 226
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene11235 biogeco2 v2.0 201
AutoFact: Guanine nucleotide-binding protein subunit beta-1 n=9 Tax=core eudicotyledons RepID=GBB1_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: g protein beta subunit 0.0
Internal
biog2_v2.0_unigene11247 biogeco2 v2.0 510
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_850516.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL07141.1| unknown protein [Arabidopsis thaliana] gb|AAM83246.1| AT3g05090/T12H1_5 [Arabidopsis thalia 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: wd repeat-containing protein 48-like 0.0
Internal
biog2_v2.0_unigene11339 biogeco2 v2.0 643
AutoFact: NLE multi-domain protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: notchless protein homolog 0.0
Putative N-terminus
biog2_v2.0_unigene11361 biogeco2 v2.0 307
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|ACI46510.1| At5g11240 [Arabidopsis thaliana] gb|AED91651.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Internal
biog2_v2.0_unigene11501 biogeco2 v2.0 242
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene11564 biogeco2 v2.0 275
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK76712.1| unknown protein [Arabidopsis thaliana] gb|AAM45004.1| unknown protein [Arabidopsis thaliana] gb|AED97944.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat domain-containing protein 83-like 0.0
Internal
biog2_v2.0_unigene11569 biogeco2 v2.0 259
AutoFact: SEC12-like protein 1 [Arabidopsis thaliana] sp|Q8GYE0.2|PHF1_ARATH RecName: Full=SEC12-like protein 1; AltName: Full=Protein PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR 1; Short=PHF-1 emb|CAB41339.1| putative protein [Arabidopsis thaliana] gb|ABI49462.1| At 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec12-like protein 1-like 0.0
Internal
biog2_v2.0_unigene11648 biogeco2 v2.0 366
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
Blast2go: cellulose synthase-like protein 0.0
unknown
biog2_v2.0_unigene11686 biogeco2 v2.0 430
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 48 0.0
Internal
biog2_v2.0_unigene11756 biogeco2 v2.0 379
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene11795 biogeco2 v2.0 312
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: sp=Protein HIRA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
biog2_v2.0_unigene11801 biogeco2 v2.0 490
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase a catalytic subunit 3 0.0
C-terminus
biog2_v2.0_unigene11838 biogeco2 v2.0 213
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
Internal
biog2_v2.0_unigene11872 biogeco2 v2.0 381
AutoFact: Metallothio multi-domain protein 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
biog2_v2.0_unigene11899 biogeco2 v2.0 338
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001078546.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB10005.1| WD-repeat protein-like [Arabidopsis thaliana] gb|AAK96726.1| WD-repeat protein-like [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 26-like 0.0
C-terminus
biog2_v2.0_unigene11930 biogeco2 v2.0 187
AutoFact: pfam12490, BCAS3, Breast carcinoma amplified sequence 3 4.0e-23
Blast2go: protein 2.43218e-16
unknown
biog2_v2.0_unigene11988 biogeco2 v2.0 427
AutoFact: transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] gb|AAR28022.1| TAF5 [Arabidopsis thaliana] gb|AED93406.1| transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation factor tfiid subunit 5-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain