Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene8743 biogeco2 v2.0 339
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
C-terminus
biog2_v2.0_unigene8764 biogeco2 v2.0 328
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK76712.1| unknown protein [Arabidopsis thaliana] gb|AAM45004.1| unknown protein [Arabidopsis thaliana] gb|AED97944.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: wd repeat domain-containing protein 83-like 0.0
unknown
biog2_v2.0_unigene8898 biogeco2 v2.0 618
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: wd repeat-containing 0.0
Internal
biog2_v2.0_unigene8989 biogeco2 v2.0 363
AutoFact: pfam02214, K_tetra, K+ channel tetramerisation domain 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel tetramerization domain-containing protein 0.0
Internal
biog2_v2.0_unigene9155 biogeco2 v2.0 487
AutoFact: SEC12-like protein 1 [Arabidopsis thaliana] sp|Q8GYE0.2|PHF1_ARATH RecName: Full=SEC12-like protein 1; AltName: Full=Protein PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR 1; Short=PHF-1 emb|CAB41339.1| putative protein [Arabidopsis thaliana] gb|ABI49462.1| At 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec12-like protein 1-like 0.0
C-terminus
biog2_v2.0_unigene9228 biogeco2 v2.0 445
AutoFact: O-FucT domain containing protein 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
unknown
biog2_v2.0_unigene9246 biogeco2 v2.0 359
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene9279 biogeco2 v2.0 571
AutoFact: drought-sensitive 1 protein [Arabidopsis thaliana] gb|AAF14658.1|AC011713_6 Contains similarity to gb|AF092102 G-protein beta subunit git5p from Schizosaccharomyces pombe and contains 2 PF|00400WD domain, G-beta repeat domains [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 76-like 0.0
C-terminus
biog2_v2.0_unigene9289 biogeco2 v2.0 531
AutoFact: Neurobeachin, putative n=1 Tax=Ricinus communis RepID=B9RZY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable inactive serine threonine-protein kinase lvsg-like 0.0
Complete
biog2_v2.0_unigene9305 biogeco2 v2.0 142
AutoFact: cell cycle arrest protein BUB3 [Arabidopsis thaliana] dbj|BAB02543.1| mitotic checkpoint protein [Arabidopsis thaliana] gb|AAM64953.1| mitotic checkpoint protein, putative [Arabidopsis thaliana] gb|AAO42274.1| putative mitotic checkpoint protein [Arabidop 0.0
Blast2go: mitotic checkpoint protein 0.0
unknown
biog2_v2.0_unigene9332 biogeco2 v2.0 856
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|ACI46510.1| At5g11240 [Arabidopsis thaliana] gb|AED91651.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Internal
biog2_v2.0_unigene9340 biogeco2 v2.0 213
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Internal
biog2_v2.0_unigene9432 biogeco2 v2.0 381
AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein pleiotropic regulatory locus 1-like 0.0
Internal
biog2_v2.0_unigene9435 biogeco2 v2.0 422
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
Internal
biog2_v2.0_unigene9515 biogeco2 v2.0 431
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
biog2_v2.0_unigene9582 biogeco2 v2.0 475
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase 0.0
Putative C-terminus
biog2_v2.0_unigene9667 biogeco2 v2.0 391
AutoFact: Wd40 protein, putative n=19 Tax=Spermatophyta RepID=B9S8B9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
N-terminus
biog2_v2.0_unigene9687 biogeco2 v2.0 328
AutoFact: SEC12-like protein 1 [Arabidopsis thaliana] sp|Q8GYE0.2|PHF1_ARATH RecName: Full=SEC12-like protein 1; AltName: Full=Protein PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR 1; Short=PHF-1 emb|CAB41339.1| putative protein [Arabidopsis thaliana] gb|ABI49462.1| At 0.0
Blast2go: sec12-like protein 1-like 0.0
unknown
biog2_v2.0_unigene9803 biogeco2 v2.0 335
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene9892 biogeco2 v2.0 414
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain