Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene13302 biogeco2 v2.0 499
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SMF9_RICCO 7.0e-32
• FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
• Blast2go: protein topless 1.34707e-31
Internal
biog2_v2.0_unigene13331 biogeco2 v2.0 529
• AutoFact: Unassigned protein
Coding
biog2_v2.0_unigene13384 biogeco2 v2.0 375
• AutoFact: protein FIZZY-related 1 [Arabidopsis thaliana] sp|Q8VZS9.1|FZR1_ARATH RecName: Full=Protein FIZZY-RELATED 1; AltName: Full=Cell cycle switch protein CCS52A2 gb|AAL36231.1| putative Srw1 protein [Arabidopsis thaliana] gb|AAM14174.1| putative Srw1 protein [ 3.0e-12
• Blast2go: protein 2.12006e-20
unknown
biog2_v2.0_unigene13515 biogeco2 v2.0 378
• AutoFact: WD-repeat cell cycle regulatory protein [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene13812 biogeco2 v2.0 474
• AutoFact: RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein emb|CAB88535.1| WD repeat domain protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Protein HIRA; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein hira 0.0
Internal
biog2_v2.0_unigene13825 biogeco2 v2.0 376
• AutoFact: transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] gb|AAR28022.1| TAF5 [Arabidopsis thaliana] gb|AED93406.1| transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: transcription initiation factor tfiid subunit 5-like 0.0
N-terminus
biog2_v2.0_unigene13826 biogeco2 v2.0 409
• AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Protein Mut11; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
Internal
biog2_v2.0_unigene13873 biogeco2 v2.0 347
• AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: f-box and wd40 domain 4.33632e-25
Putative C-terminus
biog2_v2.0_unigene13887 biogeco2 v2.0 287
• AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene13888 biogeco2 v2.0 341
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene14016 biogeco2 v2.0 307
• AutoFact: WD-repeat cell cycle regulatory protein [Medicago truncatula] 0.0
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene14072 biogeco2 v2.0 174
• AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t 0.0
• Blast2go: phospholipase a-2-activating protein 0.0
unknown
biog2_v2.0_unigene14081 biogeco2 v2.0 122
• AutoFact: Fertilization-independent endosperm (Fragment) n=2 Tax=Hieracium RepID=B1ABR5_HIEPL 0.0
• Blast2go: fertilization-independent endosperm protein 0.0
unknown
biog2_v2.0_unigene14113 biogeco2 v2.0 233
• AutoFact: pfam02214, K_tetra, K+ channel tetramerisation domain 8.0e-09
• Blast2go: potassium channel tetramerization domain-containing protein 0.0
unknown
biog2_v2.0_unigene14164 biogeco2 v2.0 352
• AutoFact: peptidyl-prolyl cis-trans isomerase SDCCAG10 [Arabidopsis thaliana] gb|AAS75308.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|ABF57285.1| At4g33060 [Arabidopsis thaliana] gb|AEE86168.1| peptidyl-prolyl cis-t 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peptidyl-prolyl cis-trans 0.0
Putative N-terminus
biog2_v2.0_unigene14237 biogeco2 v2.0 331
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK76712.1| unknown protein [Arabidopsis thaliana] gb|AAM45004.1| unknown protein [Arabidopsis thaliana] gb|AED97944.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wd repeat domain-containing protein 83-like 0.0
Putative N-terminus
biog2_v2.0_unigene14265 biogeco2 v2.0 460
• AutoFact: p450 domain containing protein 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
• Blast2go: vascular protein 0.0
Internal
biog2_v2.0_unigene14402 biogeco2 v2.0 205
• AutoFact: Unassigned protein
• Blast2go: glycine-rich protein 0.0
unknown
biog2_v2.0_unigene14426 biogeco2 v2.0 310
• AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene14439 biogeco2 v2.0 226
• AutoFact: putative beige protein [Oryza sativa Japonica Group] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 4.99016e-41
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain