Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1437 biogeco2 v2.0 998
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
FL-Next: sp=Probable WRKY transcription factor 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene4404 biogeco2 v2.0 1012
AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 0.0
FL-Next: tr=Putative truncated TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Blast2go: nbs lrr 0.0
C-terminus
biog2_v2.0_unigene4478 biogeco2 v2.0 370
AutoFact: Strong similarity to the sucrose-phosphate synthase from Craterostigma plantagineum gb|Y11795 [Arabidopsis thaliana] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sucrose-phosphate synthase 5.32664e-11
Internal
biog2_v2.0_unigene8917 biogeco2 v2.0 418
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-34
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
biog2_v2.0_unigene8955 biogeco2 v2.0 398
AutoFact: Putative NPK1-related protein kinase [Oryza sativa Japonica Group] gb|AAM47616.1|AC122147_5 Putative NPK1-related protein kinase [Oryza sativa Japonica Group] gb|AAP51983.1| Protein kinase domain containing protein [Oryza sativa Japonica Group] 9.99995e-41
Blast2go: protein 0.0
Putative coding
biog2_v2.0_unigene11315 biogeco2 v2.0 270
AutoFact: NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I9_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene12774 biogeco2 v2.0 313
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 0.0
Blast2go: retrotransposon unclassified 0.0
Coding
biog2_v2.0_unigene14533 biogeco2 v2.0 375
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 5.0e-25
FL-Next: sp=Mitogen-activated protein kinase kinase kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mitogen-activated protein kinase kinase kinase 1-like 6.14505e-35
Internal
biog2_v2.0_unigene14588 biogeco2 v2.0 335
AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs-lrr protein gm09 0.0
N-terminus
biog2_v2.0_unigene14890 biogeco2 v2.0 396
AutoFact: ABC transporter G family member 22 [Arabidopsis thaliana] ref|NP_850781.2| ABC transporter G family member 22 [Arabidopsis thaliana] sp|Q93YS4.1|AB22G_ARATH RecName: Full=ABC transporter G family member 22; Short=ABC transporter ABCG.22; Short=AtABCG22; A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 22-like 0.0
Internal
biog2_v2.0_unigene15161 biogeco2 v2.0 246
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-28
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.43514e-35
Internal
biog2_v2.0_unigene15531 biogeco2 v2.0 227
AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
Blast2go: glyoxalase ii 0.0
unknown
biog2_v2.0_unigene15718 biogeco2 v2.0 400
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog2_v2.0_unigene15733 biogeco2 v2.0 351
AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyoxalase ii 0.0
Internal
biog2_v2.0_unigene16258 biogeco2 v2.0 442
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SKK6_RICCO 1.0e-14
Blast2go: probable wrky transcription factor 12-like 4.36942e-17
unknown
biog2_v2.0_unigene18357 biogeco2 v2.0 418
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen-activated protein kinase kinase kinase 1-like 0.0
Internal
biog2_v2.0_unigene18406 biogeco2 v2.0 291
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
FL-Next: sp=Probable WRKY transcription factor 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene18886 biogeco2 v2.0 421
AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.509e-37
C-terminus
biog2_v2.0_unigene19033 biogeco2 v2.0 245
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.31558e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain