Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Homeodomain

Term: IPR001356  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene18265 biogeco2 v2.0 248
AutoFact: Homeobox transcription factor KN1 n=3 Tax=Pinaceae RepID=Q5SC65_PINTA 0.0
FL-Next: tr=Homeobox transcription factor KN1; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeobox transcription factor kn1 0.0
Internal
biog2_v2.0_unigene18460 biogeco2 v2.0 300
AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
Blast2go: homeobox transcription factor kn2 0.0
unknown
biog2_v2.0_unigene18674 biogeco2 v2.0 674
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
C-terminus
biog2_v2.0_unigene18684 biogeco2 v2.0 366
AutoFact: Homeobox transcription factor KN3 n=296 Tax=Pinaceae RepID=Q5SC63_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox transcription factor kn3 0.0
Internal
biog2_v2.0_unigene18821 biogeco2 v2.0 390
AutoFact: Homeobox transcription factor KN4 n=1 Tax=Picea mariana RepID=Q5SC62_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: homeobox transcription factor kn4 0.0
C-terminus
biog2_v2.0_unigene19004 biogeco2 v2.0 424
AutoFact: Putative wuschel homeobox protein WOX3 n=1 Tax=Pinus sylvestris RepID=C3W8A1_PINSY 1.0e-28
FL-Next: tr=Putative wuschel homeobox protein WOX3; Pinus sylvestris (Scots pine). 0.0
Blast2go: wuschel-related homeobox 3 2.16394e-28
N-terminus
biog2_v2.0_unigene19120 biogeco2 v2.0 422
AutoFact: Nop14 multi-domain protein 1.0e-08
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene19371 biogeco2 v2.0 376
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
Blast2go: homeobox-leucine zipper family protein 0.0
unknown
biog2_v2.0_unigene19576 biogeco2 v2.0 392
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
Blast2go: hd domain class transcription factor 0.0
Putative coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain