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Assembly Name: biogeco2 v2.0

Name: Dihydrofolate reductase domain

Term: IPR001796  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1395 biogeco2 v2.0 413
AutoFact: PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Vitis vinifera RepID=UPI0001982DBD 0.0
Blast2go: dihydrofolate reductase-thymidylate synthase 0.0
unknown
biog2_v2.0_unigene3993 biogeco2 v2.0 468
AutoFact: PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Vitis vinifera RepID=UPI0001982DBD 0.0
FL-Next: sp=Bifunctional dihydrofolate reductase-thymidylate synthase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dihydrofolate reductase-thymidylate synthase 0.0
C-terminus
biog2_v2.0_unigene11712 biogeco2 v2.0 97
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
Blast2go: gag-pol polyprotein 0.0
unknown
biog2_v2.0_unigene12300 biogeco2 v2.0 370
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog2_v2.0_unigene13977 biogeco2 v2.0 388
AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera] 0.0
Internal
biog2_v2.0_unigene14390 biogeco2 v2.0 120
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
unknown
biog2_v2.0_unigene14502 biogeco2 v2.0 275
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
biog2_v2.0_unigene15086 biogeco2 v2.0 366
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
biog2_v2.0_unigene15161 biogeco2 v2.0 246
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-28
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.43514e-35
Internal
biog2_v2.0_unigene15443 biogeco2 v2.0 214
AutoFact: PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Vitis vinifera RepID=UPI0001982DBD 0.0
Blast2go: dihydrofolate reductase-thymidylate synthase 0.0
unknown
biog2_v2.0_unigene15718 biogeco2 v2.0 400
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog2_v2.0_unigene16509 biogeco2 v2.0 478
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
biog2_v2.0_unigene17630 biogeco2 v2.0 253
AutoFact: PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Vitis vinifera RepID=UPI0001982DBD 0.0
FL-Next: sp=Bifunctional dihydrofolate reductase-thymidylate synthase; Daucus carota (Carrot). 0.0
Blast2go: dihydrofolate reductase-thymidylate synthase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain