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Assembly Name: biogeco2 v2.0

Name: 4Fe-4S ferredoxin-type, iron-sulpur binding domain

Term: IPR017896  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene832 biogeco2 v2.0 771
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase [NADH], amyloplastic; Medicago sativa (Alfalfa). 0.0
Blast2go: glutamate synthase 1 0.0
C-terminus
biog2_v2.0_unigene1438 biogeco2 v2.0 402
AutoFact: Hyoscyamine 6-dioxygenase, putative n=1 Tax=Ricinus communis RepID=B9RKI5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hyoscyamine 6- 0.0
Internal
biog2_v2.0_unigene2310 biogeco2 v2.0 598
AutoFact: histidine kinase-like ATPase domain-containing protein [Arabidopsis thaliana] gb|AEE84983.1| histidine kinase-like ATPase domain-containing protein [Arabidopsis thaliana] 7.0e-19
Blast2go: protein 5.41334e-21
Coding
biog2_v2.0_unigene2748 biogeco2 v2.0 380
AutoFact: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial n=4 Tax=Arabidopsis RepID=NDS8A_ARATH 0.0
Blast2go: nadh dehydrogenase 0.0
unknown
biog2_v2.0_unigene2954 biogeco2 v2.0 693
AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase l inhibitor-like protein 0.0
C-terminus
biog2_v2.0_unigene4027 biogeco2 v2.0 1249
AutoFact: Succinate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SLS5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: succinate dehydrogenase 0.0
Complete
biog2_v2.0_unigene5091 biogeco2 v2.0 1054
AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase l inhibitor-like protein 0.0
N-terminus
biog2_v2.0_unigene5494 biogeco2 v2.0 806
AutoFact: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial n=4 Tax=Arabidopsis RepID=NDS8A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nadh dehydrogenase 0.0
Complete
biog2_v2.0_unigene9508 biogeco2 v2.0 445
AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase l inhibitor-like protein 0.0
Internal
biog2_v2.0_unigene9546 biogeco2 v2.0 558
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger 0.0
Internal
biog2_v2.0_unigene10490 biogeco2 v2.0 592
AutoFact: Electron-transferring-flavoprotein dehydrogenase n=3 Tax=Arabidopsis RepID=O22854_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: electron transfer flavoprotein-ubiquinone mitochondrial-like 0.0
Putative N-terminus
biog2_v2.0_unigene10711 biogeco2 v2.0 471
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate synthase 1 0.0
Internal
biog2_v2.0_unigene10839 biogeco2 v2.0 365
AutoFact: pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable iron ascorbate oxidoreductase ddb_g0283291-like 0.0
C-terminus
biog2_v2.0_unigene11187 biogeco2 v2.0 417
AutoFact: DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] dbj|BAB11179.1| unnamed protein product [Arabidopsis thaliana] gb|ABO45691.1| At5g23240 [Arabidopsis thaliana] gb|AED93140.1| DNAJ heat shock N-terminal domain-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene14294 biogeco2 v2.0 318
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal
biog2_v2.0_unigene15791 biogeco2 v2.0 405
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Putative C-terminus
biog2_v2.0_unigene15856 biogeco2 v2.0 360
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate synthase 1 0.0
Internal
biog2_v2.0_unigene16648 biogeco2 v2.0 355
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
N-terminus
biog2_v2.0_unigene19229 biogeco2 v2.0 333
AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase l inhibitor-like protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain