|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene10004
|
biogeco2 v2.0
|
356
|
|
• AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana] gb|AAO23575.1| At5g60980/MSL3_100
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene10121
|
biogeco2 v2.0
|
383
|
|
• AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: aaa-type atpase family protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene10167
|
biogeco2 v2.0
|
1006
|
|
• AutoFact: putative DNA binding protein [Trifolium pratense]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna-binding post-transcriptional regulator csx1-like
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene10169
|
biogeco2 v2.0
|
416
|
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
5.0e-08
|
|
• Blast2go: ctc-interacting domain 11 protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene10198
|
biogeco2 v2.0
|
365
|
|
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max]
|
5.0e-34
|
|
• Blast2go: homeobox-leucine zipper protein athb-6-like
|
2.01282e-38
|
|
Coding
|
|
biog2_v2.0_unigene10206
|
biogeco2 v2.0
|
459
|
|
• AutoFact: poly(A)-binding protein [Cucumis sativus]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: poly -binding protein
|
0.0
|
|
Putative Complete
|
|
biog2_v2.0_unigene10218
|
biogeco2 v2.0
|
478
|
|
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001031566.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAK32943.1|AF367357_1 AT4g00830/A_TM018A10_14 [Arabidopsis thaliana] gb|AAM47474.1| AT4g00830/A_TM018A10
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene10252
|
biogeco2 v2.0
|
218
|
|
• AutoFact: putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine serine-rich splicing
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene10312
|
biogeco2 v2.0
|
386
|
|
• AutoFact: cyclophilin 59 [Arabidopsis thaliana] gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: peptidyl-prolyl cis-trans isomerase-like 4-like
|
0.0
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene10368
|
biogeco2 v2.0
|
328
|
|
• AutoFact: sarcoplasmic reticulum protein-like protein [Oryza sativa Japonica Group] gb|AAS07364.1| sarcoplasmic reticulum protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99835.1| RNA-binding protein Luc7-like 2, putative, expressed [Oryza sa
|
0.0
|
|
• Blast2go: rna-binding protein luc7-like expressed
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene10386
|
biogeco2 v2.0
|
446
|
|
• AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna-binding protein 5 10
|
0.0
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene10392
|
biogeco2 v2.0
|
358
|
|
• AutoFact: Os05g0427300 protein n=2 Tax=Oryza sativa RepID=Q0DI02_ORYSJ
|
1.0e-22
|
|
• Blast2go: rna recognition motif-containing protein
|
2.63375e-33
|
|
unknown
|
|
biog2_v2.0_unigene10507
|
biogeco2 v2.0
|
603
|
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
4.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene10566
|
biogeco2 v2.0
|
555
|
|
• AutoFact: polypyrimidine track-binding protein homologue [Cicer arietinum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polypyrimidine tract-binding protein homolog 3-like
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene10623
|
biogeco2 v2.0
|
518
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: unknown [Picea sitchensis]
|
2.30151e-11
|
|
Putative N-terminus
|
|
biog2_v2.0_unigene10680
|
biogeco2 v2.0
|
446
|
|
• AutoFact: DUF1777 multi-domain protein
|
1.0e-15
|
|
• Blast2go: splicing factor u2af large subunit b
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene10690
|
biogeco2 v2.0
|
408
|
|
• AutoFact: Nuclear cap-binding protein subunit 2 n=3 Tax=Andropogoneae RepID=B6TL33_MAIZE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: nuclear cap-binding protein
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene10751
|
biogeco2 v2.0
|
427
|
|
• AutoFact: PWWP domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L3U3_ARALL
|
2.94273e-44
|
|
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: pwwp domain-containing protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene10848
|
biogeco2 v2.0
|
345
|
|
• AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus]
|
3.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein Sb08g019140; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein q
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene10886
|
biogeco2 v2.0
|
616
|
|
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [
|
7.0e-22
|
|
• Blast2go: splicing factor 1
|
0.0
|
|
unknown
|
