|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene7488
|
biogeco2 v2.0
|
589
|
|
• AutoFact: DUF1777 multi-domain protein
|
5.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: p30 dbc
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene7591
|
biogeco2 v2.0
|
495
|
|
• AutoFact: putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine serine-rich splicing
|
0.0
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene7743
|
biogeco2 v2.0
|
457
|
|
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u1 small nuclear ribonucleoprotein-70k
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene7761
|
biogeco2 v2.0
|
560
|
|
• AutoFact: polypyrimidine tract-binding protein-like [Solanum tuberosum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polypyrimidine tract-binding protein homolog 2-like
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene7824
|
biogeco2 v2.0
|
621
|
|
• AutoFact: putative U2 snRNP auxiliary factor [Chenopodium rubrum]
|
1.00053e-42
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u2 snrnp auxiliary small
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene7870
|
biogeco2 v2.0
|
635
|
|
• AutoFact: peptide deformylase [Arabidopsis thaliana]
|
4.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: peptide deformylase 1b
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene7954
|
biogeco2 v2.0
|
148
|
|
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2
|
0.0
|
|
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene7991
|
biogeco2 v2.0
|
670
|
|
• AutoFact: Os07g0673500 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0D3Q1_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine serine-rich splicing
|
0.0
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene8031
|
biogeco2 v2.0
|
782
|
|
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana] gb|AAY17418.1| At1g73530 [Arabidopsis thaliana] gb|ABI49457.1| At1g73530 [Arabidopsis thaliana] gb|
|
1.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
Complete
|
|
biog2_v2.0_unigene8091
|
biogeco2 v2.0
|
581
|
|
• AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene8139
|
biogeco2 v2.0
|
457
|
|
• AutoFact: splicing factor-like protein [Vitis riparia]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine serine-rich-splicing factor rsp31-like
|
0.0
|
|
Putative N-terminus
|
|
biog2_v2.0_unigene8141
|
biogeco2 v2.0
|
398
|
|
• AutoFact: RNA-binding protein with multiple splicing, putative n=1 Tax=Ricinus communis RepID=B9SG87_RICCO
|
0.0
|
|
• Blast2go: cell wall integrity protein scw1
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene8189
|
biogeco2 v2.0
|
507
|
|
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R9V5_RICCO
|
0.0
|
|
• Blast2go: splicing factor 1
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene8232
|
biogeco2 v2.0
|
804
|
|
• AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI
|
0.0
|
|
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: initiation factor 3g
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene8239
|
biogeco2 v2.0
|
418
|
|
• AutoFact: Strictosidine synthase, putative n=1 Tax=Ricinus communis RepID=B9RJ21_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: strictosidine synthase family protein
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene8268
|
biogeco2 v2.0
|
540
|
|
• AutoFact: S-locus lectin protein kinase-like protein [Arabidopsis thaliana] sp|O64477.1|Y2913_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130; Flags: Precursor gb|AAD12030.1| putative receptor-like protein kinase [Arabido
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene8281
|
biogeco2 v2.0
|
407
|
|
• AutoFact: polypyrimidine tract-binding protein-like [Solanum tuberosum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polypyrimidine tract-binding protein homolog 2-like
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene8333
|
biogeco2 v2.0
|
419
|
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
1.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: tho complex subunit
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene8416
|
biogeco2 v2.0
|
627
|
|
• AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: la protein 1
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene8492
|
biogeco2 v2.0
|
375
|
|
• AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana] gb|AAO23575.1| At5g60980/MSL3_100
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
C-terminus
|
