|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene17147
|
biogeco2 v2.0
|
526
|
|
• AutoFact: CDC27 multi-domain protein
|
4.0e-09
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein q
|
4.74326e-41
|
|
Coding
|
|
biog2_v2.0_unigene17178
|
biogeco2 v2.0
|
248
|
|
• AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
|
2.0e-33
|
|
• Blast2go: rna binding protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene17293
|
biogeco2 v2.0
|
169
|
|
• AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-]
|
0.0
|
|
• FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 3, mitochondrial; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene17302
|
biogeco2 v2.0
|
475
|
|
• AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana]
|
9.99967e-42
|
|
• Blast2go: protein arginine serine-rich 45
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene17335
|
biogeco2 v2.0
|
442
|
|
• AutoFact: splicing factor SR1B [Arabidopsis thaliana] gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
|
2.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: splicing factor sr1b
|
1.49436e-32
|
|
N-terminus
|
|
biog2_v2.0_unigene17359
|
biogeco2 v2.0
|
215
|
|
• AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ
|
3.00018e-42
|
|
• Blast2go: 33 kda chloroplastic-like
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene17364
|
biogeco2 v2.0
|
228
|
|
• AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO
|
0.0
|
|
• Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene17456
|
biogeco2 v2.0
|
420
|
|
• AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE76829.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: rna recognition motif -containing protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene17462
|
biogeco2 v2.0
|
516
|
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
5.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene17552
|
biogeco2 v2.0
|
269
|
|
• AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: rna-binding protein 5 10
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene17602
|
biogeco2 v2.0
|
415
|
|
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene17612
|
biogeco2 v2.0
|
541
|
|
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO
|
0.0
|
|
• Blast2go: u1 small nuclear ribonucleoprotein-70k
|
0.0
|
|
Putative coding
|
|
biog2_v2.0_unigene17659
|
biogeco2 v2.0
|
515
|
|
• AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group]
|
0.0
|
|
• Blast2go: rna-binding protein
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene17670
|
biogeco2 v2.0
|
541
|
|
• AutoFact: RNA-binding protein MEI2, putative; 36123-32976 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein mei2-like 2-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene17681
|
biogeco2 v2.0
|
480
|
|
• AutoFact: [T] COG2062 Phosphohistidine phosphatase SixA
|
3.0e-11
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene17693
|
biogeco2 v2.0
|
1422
|
|
• AutoFact: poly(A)-binding protein [Daucus carota]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
biog2_v2.0_unigene17748
|
biogeco2 v2.0
|
755
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: nucleic acid binding
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene17756
|
biogeco2 v2.0
|
226
|
|
• AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo]
|
4.0e-19
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein r
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene17758
|
biogeco2 v2.0
|
674
|
|
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene17778
|
biogeco2 v2.0
|
1416
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
C-terminus
|
