Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene14522 biogeco2 v2.0 226
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown
biog2_v2.0_unigene14555 biogeco2 v2.0 342
AutoFact: ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL55992.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene14705 biogeco2 v2.0 339
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
biog2_v2.0_unigene14734 biogeco2 v2.0 129
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HYI3_POPTR 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dicer-like 2 4.83694e-39
Internal
biog2_v2.0_unigene14835 biogeco2 v2.0 271
AutoFact: Chromatin remodelling complex ATPase chain isw-1, putative n=1 Tax=Ricinus communis RepID=B9S022_RICCO 8.0e-30
Blast2go: chromatin remodelling complex atpase chain isw- 3.6255e-33
unknown
biog2_v2.0_unigene15010 biogeco2 v2.0 526
AutoFact: ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 6301] ref|YP_400096.1| ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 7942] dbj|BAD78660.1| ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 6301] gb|ABB57109.1| ATP-de 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 0.0
N-terminus
biog2_v2.0_unigene15050 biogeco2 v2.0 305
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
biog2_v2.0_unigene15278 biogeco2 v2.0 317
AutoFact: Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene15451 biogeco2 v2.0 219
AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
Blast2go: dead-box atp-dependent rna helicase 7-like 0.0
unknown
biog2_v2.0_unigene15472 biogeco2 v2.0 390
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15618 biogeco2 v2.0 377
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
biog2_v2.0_unigene15626 biogeco2 v2.0 422
AutoFact: methyltransferase [Arabidopsis thaliana] emb|CAB82287.1| putative protein [Arabidopsis thaliana] gb|AAL07072.1| unknown protein [Arabidopsis thaliana] gb|AAN13203.1| unknown protein [Arabidopsis thaliana] gb|AAN60352.1| unknown [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15632 biogeco2 v2.0 304
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
C-terminus
biog2_v2.0_unigene15659 biogeco2 v2.0 478
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable atp-dependent rna helicase ythdc2-like 0.0
Putative N-terminus
biog2_v2.0_unigene15868 biogeco2 v2.0 323
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead box-like rna helicase 0.0
C-terminus
biog2_v2.0_unigene15921 biogeco2 v2.0 225
AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene15989 biogeco2 v2.0 388
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable atp-dependent rna helicase ythdc2-like 0.0
Internal
biog2_v2.0_unigene16171 biogeco2 v2.0 553
AutoFact: Putative chloroplast RNA helicase VDL isoform 1 n=3 Tax=Nicotiana tabacum RepID=Q9FE48_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 58 0.0
Internal
biog2_v2.0_unigene16433 biogeco2 v2.0 216
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: helicase domain-containing protein 0.0
Internal
biog2_v2.0_unigene16534 biogeco2 v2.0 270
AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain