|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene2550
|
biogeco2 v2.0
|
844
|
|
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase 53-like
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene2588
|
biogeco2 v2.0
|
393
|
|
• AutoFact: MIP-T3 multi-domain protein
|
8.0e-16
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene2681
|
biogeco2 v2.0
|
485
|
|
• AutoFact: Cytochrome c oxidase subunit 5C n=8 Tax=Poaceae RepID=COX5C_ORYSJ
|
3.0e-11
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: cytochrome c oxidase subunit 5c-like
|
4.40264e-20
|
|
Complete
|
|
biog2_v2.0_unigene2718
|
biogeco2 v2.0
|
785
|
|
• AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: asparaginyl-trna cytoplasmic 1-like
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene2960
|
biogeco2 v2.0
|
534
|
|
• AutoFact: PRP38 multi-domain protein
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor 38b
|
0.0
|
|
Putative coding
|
|
biog2_v2.0_unigene3145
|
biogeco2 v2.0
|
1035
|
|
• AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: protein transport protein sec31
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene3189
|
biogeco2 v2.0
|
838
|
|
• AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chromatin remodeling complex subunit
|
0.0
|
|
Putative Complete
|
|
biog2_v2.0_unigene3288
|
biogeco2 v2.0
|
444
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene3348
|
biogeco2 v2.0
|
605
|
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase 37-like
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene3402
|
biogeco2 v2.0
|
629
|
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase chloroplastic-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene3579
|
biogeco2 v2.0
|
463
|
|
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO
|
0.0
|
|
• FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM
|
0.0
|
|
• Blast2go: atp-dependent helicase brm-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene3758
|
biogeco2 v2.0
|
341
|
|
• AutoFact: PRP38_assoc multi-domain protein
|
3.0e-09
|
|
Putative coding
|
|
biog2_v2.0_unigene3803
|
biogeco2 v2.0
|
418
|
|
• AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: upstream element-binding protein
|
0.0
|
|
Putative N-terminus
|
|
biog2_v2.0_unigene3808
|
biogeco2 v2.0
|
212
|
|
• AutoFact: RNA helicase [Arabidopsis thaliana] gb|AAD39319.1|AC007258_8 Very similar to helicases [Arabidopsis thaliana] dbj|BAD44599.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33616.1| RNA helicase [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: skiv2l2 protein
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene3944
|
biogeco2 v2.0
|
333
|
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase 14
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene4008
|
biogeco2 v2.0
|
208
|
|
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8B1_RICCO
|
0.0
|
|
• Blast2go: rna helicase like protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene4121
|
biogeco2 v2.0
|
557
|
|
• AutoFact: copper ion transmembrane transporter [Arabidopsis thaliana] gb|AAM67286.1| unknown [Arabidopsis thaliana] gb|AEC09465.1| copper ion transmembrane transporter [Arabidopsis thaliana]
|
9.99995e-41
|
|
• FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: copper ion transmembrane transporter
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene4129
|
biogeco2 v2.0
|
1566
|
|
• AutoFact: Eukaryotic initiation factor 4A-1 n=67 Tax=Magnoliophyta RepID=IF4A1_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: eukaryotic initiation factor 4a
|
0.0
|
|
Complete
|
|
biog2_v2.0_unigene4368
|
biogeco2 v2.0
|
804
|
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: nicotiana eukaryotic translation initiation factor 4a
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene4525
|
biogeco2 v2.0
|
1243
|
|
• AutoFact: Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Complete
|
