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Assembly Name: biogeco2 v2.0

Name: Double-stranded RNA-binding

Term: IPR001159  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene16254 biogeco2 v2.0 515
AutoFact: Double-stranded RNA-binding protein 6 n=1 Tax=Oryza sativa Japonica Group RepID=DRB6_ORYSJ 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 0.0
N-terminus
biog2_v2.0_unigene16513 biogeco2 v2.0 72
AutoFact: dsRNA-binding protein [Brassica oleracea var. gongylodes] emb|CAD59428.1| dsRNA-binding protein [Brassica oleracea var. gemmifera] 7.00649e-44
Blast2go: dsrna-binding protein 0.0
unknown
biog2_v2.0_unigene17011 biogeco2 v2.0 704
AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA 0.0
FL-Next: Isoform 2 of Double-stranded RNA-binding protein 5 OS=Oryza sativa subsp. japonica GN=DRB5 0.0
Blast2go: double-stranded rna binding protein 0.0
Putative C-terminus
biog2_v2.0_unigene17239 biogeco2 v2.0 442
AutoFact: beta-glucosidase [Arabidopsis thaliana] emb|CAB61946.1| beta-D-glucan exohydrolase-like protein [Arabidopsis thaliana] gb|AAL32794.1| beta-D-glucan exohydrolase-like protein [Arabidopsis thaliana] gb|AAM13345.1| beta-D-glucan exohydrolase-like protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-d-glucan exohydrolase-like protein 0.0
Internal
biog2_v2.0_unigene18204 biogeco2 v2.0 348
AutoFact: RecName: Full=Endoribonuclease Dicer homolog 4; AltName: Full=Dicer-like protein 4; Short=OsDCL4; AltName: Full=Protein SHOOT ORGANIZATION 1 gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 4 0.0
Internal
biog2_v2.0_unigene18281 biogeco2 v2.0 404
AutoFact: Hydrolase, hydrolyzing O-glycosyl compounds, putative n=1 Tax=Ricinus communis RepID=B9SD66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysosomal beta glucosidase-like 0.0
Internal
biog2_v2.0_unigene18796 biogeco2 v2.0 474
AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata] 0.0
Blast2go: dsrna-binding protein 3 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain