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Assembly Name: biogeco2 v2.0

Name: ABC transporter, conserved site

Term: IPR017871  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene175 biogeco2 v2.0 360
AutoFact: ABC-2 type transporter-like protein [Arabidopsis thaliana] sp|Q9ZUU9.2|AB3G_ARATH RecName: Full=ABC transporter G family member 3; Short=ABC transporter ABCG.3; Short=AtABCG3; AltName: Full=White-brown complex homolog protein 3; Short=AtWBC3 gb|AEC08075.1 1.4013e-45
Blast2go: white-brown-complex abc transporter family 0.0
unknown
biog2_v2.0_unigene301 biogeco2 v2.0 685
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein binding 0.0
Complete
biog2_v2.0_unigene365 biogeco2 v2.0 327
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Putative coding
biog2_v2.0_unigene372 biogeco2 v2.0 453
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 1-like 0.0
Putative C-terminus
biog2_v2.0_unigene462 biogeco2 v2.0 703
AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AEE79818.1| protein kinase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Internal
biog2_v2.0_unigene496 biogeco2 v2.0 812
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene606 biogeco2 v2.0 939
AutoFact: Isochorismatase family protein [Arabidopsis thaliana] gb|AAL25541.1| AT3g16190/MYA6_2 [Arabidopsis thaliana] gb|AAM64447.1| putative hydrolase [Arabidopsis thaliana] gb|AAN28858.1| At3g16190/MYA6_2 [Arabidopsis thaliana] gb|AEE75782.1| Isochorismatase fam 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxyureidoacrylate ureidoacrylate amidohydrolase -like 0.0
Complete
biog2_v2.0_unigene766 biogeco2 v2.0 456
AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RT11_RICCO 0.0
FL-Next: tr=Receptor serine-threonine protein kinase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein kinase family protein 0.0
C-terminus
biog2_v2.0_unigene854 biogeco2 v2.0 533
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
Blast2go: nuclear transcription factor y subunit a-1 0.0
unknown
biog2_v2.0_unigene952 biogeco2 v2.0 605
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog2_v2.0_unigene988 biogeco2 v2.0 914
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter family protein 0.0
Internal
biog2_v2.0_unigene1108 biogeco2 v2.0 393
AutoFact: RecName: Full=ABC transporter C family member 9; Short=ABC transporter ABCC.9; Short=AtABCC9; AltName: Full=ATP-energized glutathione S-conjugate pump 9; AltName: Full=Glutathione S-conjugate-transporting ATPase 9; AltName: Full=Multidrug resistance-assoc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
N-terminus
biog2_v2.0_unigene1132 biogeco2 v2.0 747
AutoFact: ABC transporter F family member 3 [Arabidopsis thaliana] sp|Q8H0V6.1|AB3F_ARATH RecName: Full=ABC transporter F family member 3; Short=ABC transporter ABCF.3; Short=AtABCF3; AltName: Full=GCN20-type ATP-binding cassette protein GCN3 gb|AAN72026.1| ABC tra 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
Internal
biog2_v2.0_unigene1138 biogeco2 v2.0 457
AutoFact: Acetyl-CoA carboxylase n=7 Tax=rosids RepID=D2CFN2_9ROSI 0.0
FL-Next: sp=Acetyl-CoA carboxylase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: acetyl- carboxylase 0.0
C-terminus
biog2_v2.0_unigene1258 biogeco2 v2.0 1448
AutoFact: Serine/threonine-protein kinase n=1 Tax=Cucumis melo subsp. melo RepID=E5GB79_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Putative C-terminus
biog2_v2.0_unigene1278 biogeco2 v2.0 338
AutoFact: Acetyl-CoA carboxylase n=7 Tax=rosids RepID=D2CFN2_9ROSI 0.0
FL-Next: sp=Acetyl-CoA carboxylase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: acetyl- carboxylase 0.0
Internal
biog2_v2.0_unigene1316 biogeco2 v2.0 953
AutoFact: Cell wall invertase n=2 Tax=Fragaria x ananassa RepID=Q9ZP42_FRAAN 0.0
FL-Next: sp=Beta-fructofuranosidase, cell wall isozyme; Pisum sativum (Garden pea). 0.0
Blast2go: achain crystal structure of a cell-wall invertase from arabidopsis thaliana in complex with sucrose 0.0
Internal
biog2_v2.0_unigene1429 biogeco2 v2.0 1174
AutoFact: ABC transporter family protein n=2 Tax=Malpighiales RepID=B9GL16_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
N-terminus
biog2_v2.0_unigene1548 biogeco2 v2.0 1835
AutoFact: RecName: Full=Probable pleiotropic drug resistance protein 2 emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00885.1| TPA_exp: PDR2 ABC transporter [Oryza sativa (japonica cultivar-group)] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
biog2_v2.0_unigene2152 biogeco2 v2.0 794
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGK4.1|Y2165_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At2g16250; Flags: Precursor gb|ACN59289.1| leucine-rich repeat receptor-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at2g16250-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain