Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: SMCs flexible hinge

Term: IPR010935  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene365 biogeco2 v2.0 327
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Putative coding
biog2_v2.0_unigene2161 biogeco2 v2.0 729
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
N-terminus
biog2_v2.0_unigene5659 biogeco2 v2.0 823
AutoFact: Cysteine-type peptidase, putative n=1 Tax=Ricinus communis RepID=B9T2T7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin thioesterase otu1 0.0
C-terminus
biog2_v2.0_unigene7492 biogeco2 v2.0 727
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
biog2_v2.0_unigene8295 biogeco2 v2.0 580
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
biog2_v2.0_unigene9739 biogeco2 v2.0 369
AutoFact: pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain 1.0e-22
FL-Next: sp=Structural maintenance of chromosomes protein 2-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
Internal
biog2_v2.0_unigene9918 biogeco2 v2.0 558
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: smc3 protein 0.0
Putative C-terminus
biog2_v2.0_unigene10353 biogeco2 v2.0 392
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 3.0e-37
FL-Next: sp=Structural maintenance of chromosomes protein 2-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
C-terminus
biog2_v2.0_unigene10681 biogeco2 v2.0 418
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog2_v2.0_unigene11978 biogeco2 v2.0 414
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
Internal
biog2_v2.0_unigene13880 biogeco2 v2.0 297
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=SMC1 protein; Oryza sativa (Rice). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
C-terminus
biog2_v2.0_unigene16473 biogeco2 v2.0 262
AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain