Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13140 biogeco2 v2.0 399
AutoFact: HSF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ32_MALDO 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat stress transcription factor b-4 3.89904e-32
Internal
biog2_v2.0_unigene13355 biogeco2 v2.0 712
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
biog2_v2.0_unigene14067 biogeco2 v2.0 153
AutoFact: putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa Japonica Group] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene14145 biogeco2 v2.0 444
AutoFact: Alkaloid o-methyltransferase related n=2 Tax=Populus trichocarpa RepID=B9I670_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alkaloid o-methyltransferase related 0.0
Internal
biog2_v2.0_unigene14760 biogeco2 v2.0 346
AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
FL-Next: tr=Caffeic acid ortho-methyltransferase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: caffeic acid o-methyltransferase 0.0
Internal
biog2_v2.0_unigene14793 biogeco2 v2.0 305
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
Internal
biog2_v2.0_unigene14834 biogeco2 v2.0 418
AutoFact: casein kinase [Beta vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase i isoform delta-like 0.0
Internal
biog2_v2.0_unigene14932 biogeco2 v2.0 377
AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
Blast2go: telomere repeat binding factor 1 0.0
unknown
biog2_v2.0_unigene15478 biogeco2 v2.0 337
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
C-terminus
biog2_v2.0_unigene15645 biogeco2 v2.0 303
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
Internal
biog2_v2.0_unigene15789 biogeco2 v2.0 407
AutoFact: Casein kinase n=1 Tax=Beta vulgaris RepID=A2I5G0_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene15935 biogeco2 v2.0 410
AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
FL-Next: tr=Caffeic acid ortho-methyltransferase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: alkaloid o-methyltransferase related 0.0
Internal
biog2_v2.0_unigene16079 biogeco2 v2.0 391
AutoFact: Alkaloid o-methyltransferase related n=2 Tax=Populus trichocarpa RepID=B9I670_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alkaloid o-methyltransferase related 0.0
Internal
biog2_v2.0_unigene16138 biogeco2 v2.0 310
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
Blast2go: transcription factor e2f 0.0
Coding
biog2_v2.0_unigene16679 biogeco2 v2.0 621
AutoFact: pfam00294, PfkB, pfkB family carbohydrate kinase 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: carbohydrate pyrimidine family protein 0.0
N-terminus
biog2_v2.0_unigene16839 biogeco2 v2.0 630
AutoFact: heat shock factor protein hsf8-related [Glycine max] 0.0
Blast2go: heat shock transcription factor 1 0.0
Putative coding
biog2_v2.0_unigene16957 biogeco2 v2.0 237
AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
Internal
biog2_v2.0_unigene18234 biogeco2 v2.0 133
AutoFact: translation initiation factor 3 subunit K [Arabidopsis thaliana] sp|Q9SZA3.1|EIF3K_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit K; Short=eIF3k; AltName: Full=eIF-3 p25 gb|AAG53637.1|AF291713_1 initiation factor 3k [Arabidopsis th 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene18527 biogeco2 v2.0 436
AutoFact: putative COP9 signalosome complex subunit 2 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cop9 signalosome complex subunit 2-like 0.0
Internal
biog2_v2.0_unigene18563 biogeco2 v2.0 123
AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 1.0e-28
Blast2go: histone h1-like protein 2.10941e-32
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain