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Assembly Name: biogeco2 v2.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene8887 biogeco2 v2.0 289
AutoFact: MYB transcription factor MYB107 [Glycine max] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor myb107 0.0
Putative C-terminus
biog2_v2.0_unigene9946 biogeco2 v2.0 348
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon gag protein 1.13055e-34
Internal
biog2_v2.0_unigene10443 biogeco2 v2.0 518
AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
N-terminus
biog2_v2.0_unigene10752 biogeco2 v2.0 109
AutoFact: COP9 signalosome complex subunit 4 [Arabidopsis thaliana] sp|Q8L5U0.2|CSN4_ARATH RecName: Full=COP9 signalosome complex subunit 4; Short=AtS4; Short=Signalosome subunit 4; AltName: Full=Constitutive photomorphogenesis protein 8; AltName: Full=Protein FUSC 0.0
Blast2go: cop9 signalosome complex subunit 4 0.0
unknown
biog2_v2.0_unigene11026 biogeco2 v2.0 108
AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_974103.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_001185347.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|Q9C9V6.1|Y1790_ARATH Re 0.0
FL-Next: sp=BTB/POZ domain-containing protein At1g67900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phototropic-responsive nph3-like protein 0.0
Internal
biog2_v2.0_unigene11071 biogeco2 v2.0 240
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna sigma 70 subfamily 0.0
C-terminus
biog2_v2.0_unigene11076 biogeco2 v2.0 306
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
N-terminus
biog2_v2.0_unigene11168 biogeco2 v2.0 509
AutoFact: Casein kinase n=1 Tax=Beta vulgaris RepID=A2I5G0_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene11222 biogeco2 v2.0 245
AutoFact: MYB transcription factor MYB107 [Glycine max] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor myb107 0.0
Internal
biog2_v2.0_unigene11327 biogeco2 v2.0 454
AutoFact: Phototropic-responsive NPH3 protein [Arabidopsis thaliana] sp|Q9FKB6.1|Y5880_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48800 dbj|BAB09433.1| non-phototropic hypocotyl-like protein [Arabidopsis thaliana] gb|AED95726.1| Phototropic-responsiv 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene11355 biogeco2 v2.0 502
AutoFact: Heat shock transcription factor (HSF) [Glycine max] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat stress transcription factor b-4 0.0
Internal
biog2_v2.0_unigene11704 biogeco2 v2.0 484
AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clathrin binding 0.0
N-terminus
biog2_v2.0_unigene11708 biogeco2 v2.0 257
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene11909 biogeco2 v2.0 217
AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
Blast2go: dna topoisomerase 6 subunit a-like 0.0
unknown
biog2_v2.0_unigene12069 biogeco2 v2.0 446
AutoFact: Phototropic-responsive NPH3 family protein [Arabidopsis thaliana] sp|Q9LUB9.1|Y5813_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48130 dbj|BAA96993.1| unnamed protein product [Arabidopsis thaliana] gb|AED95622.1| Phototropic-responsive NPH3 f 6.0e-33
Blast2go: phototropic-responsive nph3 family protein 3.79752e-43
Coding
biog2_v2.0_unigene12263 biogeco2 v2.0 682
AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein at1g30440-like 0.0
Internal
biog2_v2.0_unigene12330 biogeco2 v2.0 723
AutoFact: MYB transcription factor MYB107 [Glycine max] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
N-terminus
biog2_v2.0_unigene12749 biogeco2 v2.0 273
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
unknown
biog2_v2.0_unigene12903 biogeco2 v2.0 113
AutoFact: 26S proteasome regulatory subunit N6 [Arabidopsis thaliana] gb|AAF88122.1|AC021043_15 Similar to 26S proteasome subunits [Arabidopsis thaliana] gb|AAK44018.1|AF370203_1 putative 19S proteosome subunit 9 [Arabidopsis thaliana] gb|AAL07160.1| putative 19S p 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene13105 biogeco2 v2.0 217
AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeic acid o-methyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain