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Assembly Name: biogeco2 v2.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene91 biogeco2 v2.0 433
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TWM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene142 biogeco2 v2.0 1470
AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene146 biogeco2 v2.0 869
AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trehalose-phosphate synthase 0.0
Complete
biog2_v2.0_unigene213 biogeco2 v2.0 531
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable ubiquitin-conjugating enzyme e2 23-like 0.0
Complete
biog2_v2.0_unigene272 biogeco2 v2.0 436
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.87835e-34
C-terminus
biog2_v2.0_unigene655 biogeco2 v2.0 526
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 3 [Arabidopsis thaliana] gb|AAK32926.1|AF367339_1 At2g11520/F14P14.15 [Arabidopsis thaliana] gb|AAD28055.2| putative protein kinase [Arabidopsis thaliana] gb|AAM16251.1| At2g11520/F14P14.15 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene675 biogeco2 v2.0 1259
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
N-terminus
biog2_v2.0_unigene800 biogeco2 v2.0 1370
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
biog2_v2.0_unigene827 biogeco2 v2.0 766
AutoFact: Trehalose phosphate synthase n=1 Tax=Selaginella moellendorffii RepID=D8QWY1_SELML 0.0
FL-Next: sp=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trehalose phosphate synthase 0.0
Internal
biog2_v2.0_unigene919 biogeco2 v2.0 1009
AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene975 biogeco2 v2.0 577
AutoFact: Potassium transporter HAK2p n=1 Tax=Mesembryanthemum crystallinum RepID=Q94KC6_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 2 0.0
Internal
biog2_v2.0_unigene1187 biogeco2 v2.0 437
AutoFact: Hemolysin III-related family protein (Fragment) n=1 Tax=Lilium longiflorum RepID=A6MH02_LILLO 3.0e-23
Blast2go: protein 4.8157e-26
unknown
biog2_v2.0_unigene1354 biogeco2 v2.0 1096
AutoFact: uridylyltransferase-related protein [Arabidopsis thaliana] gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana] gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana] gb|AAP13425.1| At1g16880 [Arabidopsis thaliana] gb|AEE29513.1| urid 0.0
FL-Next: sp=Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: uridylyltransferase-related protein 0.0
Complete
biog2_v2.0_unigene1508 biogeco2 v2.0 667
AutoFact: Putative NBS-LRR protein G8029 (Fragment) n=2 Tax=Pinus monticola RepID=Q6WE85_PINMO 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs-lrr protein g8029 0.0
Putative C-terminus
biog2_v2.0_unigene1611 biogeco2 v2.0 383
AutoFact: WS00727.B21_N20 WS-PS-N-A-8 Picea glauca cDNA clone WS00727_N20 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene1904 biogeco2 v2.0 702
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
C-terminus
biog2_v2.0_unigene1972 biogeco2 v2.0 541
AutoFact: FERONIA receptor-like kinase [Cardamine flexuosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: feronia receptor-like kinase 0.0
Internal
biog2_v2.0_unigene2067 biogeco2 v2.0 365
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
C-terminus
biog2_v2.0_unigene2195 biogeco2 v2.0 371
AutoFact: protein shoot gravitropism 2 (SGR2) [Arabidopsis thaliana] dbj|BAB71959.1| shoot gravitropism 2 [Arabidopsis thaliana] gb|AEE31360.1| protein shoot gravitropism 2 (SGR2) [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shoot gravitropism 2 0.0
Internal
biog2_v2.0_unigene2210 biogeco2 v2.0 560
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain