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Assembly Name: biogeco2 v2.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13887 biogeco2 v2.0 287
AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene14426 biogeco2 v2.0 310
AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene14520 biogeco2 v2.0 358
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
Blast2go: pentatricopeptide repeat protein 0.0
unknown
biog2_v2.0_unigene14588 biogeco2 v2.0 335
AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs-lrr protein gm09 0.0
N-terminus
biog2_v2.0_unigene14750 biogeco2 v2.0 377
AutoFact: Amino acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S5B3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: act domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene14863 biogeco2 v2.0 733
AutoFact: Sugar carrier protein A n=6 Tax=Andropogoneae RepID=B6TMZ9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hexose transporter 0.0
Internal
biog2_v2.0_unigene15001 biogeco2 v2.0 293
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
N-terminus
biog2_v2.0_unigene15161 biogeco2 v2.0 246
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-28
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.43514e-35
Internal
biog2_v2.0_unigene15327 biogeco2 v2.0 309
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
Blast2go: ring u-box domain-containing protein 0.0
Putative coding
biog2_v2.0_unigene15342 biogeco2 v2.0 298
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene15345 biogeco2 v2.0 386
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tmv resistance protein n-like 0.0
Internal
biog2_v2.0_unigene15498 biogeco2 v2.0 255
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Internal
biog2_v2.0_unigene15510 biogeco2 v2.0 280
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49170, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2261; Flags: Precursor gb|AAW62962.1| emb 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 3.82753e-38
Internal
biog2_v2.0_unigene15731 biogeco2 v2.0 623
AutoFact: Urease n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNN7_PHYPA 0.0
FL-Next: sp=Urease; Canavalia ensiformis (Jack bean) (Horse bean). 0.0
Blast2go: urease 0.0
Internal
biog2_v2.0_unigene15848 biogeco2 v2.0 151
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 2.0e-21
Blast2go: hat family dimerisation domain containing protein 1.69322e-26
unknown
biog2_v2.0_unigene16107 biogeco2 v2.0 309
AutoFact: protein trichome berefringence-like 7 [Arabidopsis thaliana] gb|AEE32362.1| protein trichome berefringence-like 7 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein trichome berefringence-like 7 0.0
Internal
biog2_v2.0_unigene16159 biogeco2 v2.0 361
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 3 [Arabidopsis thaliana] gb|AAK32926.1|AF367339_1 At2g11520/F14P14.15 [Arabidopsis thaliana] gb|AAD28055.2| putative protein kinase [Arabidopsis thaliana] gb|AAM16251.1| At2g11520/F14P14.15 [Arabidopsis 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene16292 biogeco2 v2.0 569
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene16347 biogeco2 v2.0 372
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
FL-Next: sp=Probable ubiquitin-conjugating enzyme E2 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable ubiquitin-conjugating enzyme e2 23-like 0.0
Internal
biog2_v2.0_unigene16498 biogeco2 v2.0 481
AutoFact: Vacuolar sorting protein 39 [Arabidopsis thaliana] gb|AAM20730.1| unknown protein [Arabidopsis thaliana] gb|AEE86679.1| Vacuolar sorting protein 39 [Arabidopsis thaliana] 0.0
FL-Next: tr=TVLP1; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: vam6 vps39-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain