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Assembly Name: biogeco2 v2.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene265 biogeco2 v2.0 284
AutoFact: chloroplast biotin carboxylase [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: biotin carboxylase precursor 0.0
N-terminus
biog2_v2.0_unigene547 biogeco2 v2.0 956
AutoFact: Alpha-expansin 13, putative n=1 Tax=Ricinus communis RepID=B9SKR9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-expansin 13 0.0
Complete
biog2_v2.0_unigene796 biogeco2 v2.0 191
AutoFact: fimbrin-like protein 2 [Arabidopsis thaliana] sp|Q9FKI0.1|FIMB2_ARATH RecName: Full=Fimbrin-like protein 2 dbj|BAB09267.1| fimbrin [Arabidopsis thaliana] gb|AAK76454.1| putative fimbrin protein [Arabidopsis thaliana] gb|AAN13139.1| putative fimbrin protei 0.0
FL-Next: sp=Fimbrin-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fimbrin-like protein 2-like 0.0
Internal
biog2_v2.0_unigene807 biogeco2 v2.0 456
AutoFact: putative clathrin assembly protein [Arabidopsis thaliana] sp|P94017.2|CAP9_ARATH RecName: Full=Putative clathrin assembly protein At1g14910 gb|AAM20134.1| unknown protein [Arabidopsis thaliana] gb|AEE29241.1| putative clathrin assembly protein [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clathrin assembly protein at2g01600-like isoform 1 0.0
Internal
biog2_v2.0_unigene923 biogeco2 v2.0 504
AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bidirectional sugar transporter sweet1-like 0.0
Putative N-terminus
biog2_v2.0_unigene932 biogeco2 v2.0 765
AutoFact: putative clathrin assembly protein [Arabidopsis thaliana] sp|P94017.2|CAP9_ARATH RecName: Full=Putative clathrin assembly protein At1g14910 gb|AAM20134.1| unknown protein [Arabidopsis thaliana] gb|AEE29241.1| putative clathrin assembly protein [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clathrin assembly protein at2g01600-like isoform 1 0.0
N-terminus
biog2_v2.0_unigene1138 biogeco2 v2.0 457
AutoFact: Acetyl-CoA carboxylase n=7 Tax=rosids RepID=D2CFN2_9ROSI 0.0
FL-Next: sp=Acetyl-CoA carboxylase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: acetyl- carboxylase 0.0
C-terminus
biog2_v2.0_unigene1170 biogeco2 v2.0 320
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9IAQ7_POPTR 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog2_v2.0_unigene1278 biogeco2 v2.0 338
AutoFact: Acetyl-CoA carboxylase n=7 Tax=rosids RepID=D2CFN2_9ROSI 0.0
FL-Next: sp=Acetyl-CoA carboxylase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: acetyl- carboxylase 0.0
Internal
biog2_v2.0_unigene1767 biogeco2 v2.0 849
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: expansin 0.0
Complete
biog2_v2.0_unigene1775 biogeco2 v2.0 990
AutoFact: fimbrin-like protein 2 [Arabidopsis thaliana] sp|Q9FKI0.1|FIMB2_ARATH RecName: Full=Fimbrin-like protein 2 dbj|BAB09267.1| fimbrin [Arabidopsis thaliana] gb|AAK76454.1| putative fimbrin protein [Arabidopsis thaliana] gb|AAN13139.1| putative fimbrin protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fimbrin-like protein 2-like 0.0
Complete
biog2_v2.0_unigene2538 biogeco2 v2.0 2110
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete
biog2_v2.0_unigene2778 biogeco2 v2.0 507
AutoFact: Probable aldehyde dehydrogenase n=1 Tax=Linum usitatissimum RepID=ALDH_LINUS 0.0
FL-Next: sp=Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: delta-1-pyrroline-5-carboxylate dehydrogenase mitochondrial-like 0.0
C-terminus
biog2_v2.0_unigene2791 biogeco2 v2.0 838
AutoFact: chloroplast biotin carboxylase [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: biotin carboxylase precursor 0.0
C-terminus
biog2_v2.0_unigene2995 biogeco2 v2.0 707
AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 10 0.0
C-terminus
biog2_v2.0_unigene3245 biogeco2 v2.0 601
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 0.0
Putative Complete
biog2_v2.0_unigene3319 biogeco2 v2.0 462
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chitin-inducible gibberellin-responsive protein 0.0
C-terminus
biog2_v2.0_unigene3324 biogeco2 v2.0 366
AutoFact: Putative carbamoyl phosphate synthase large subunit n=1 Tax=Nicotiana tabacum RepID=Q8L6J9_TOBAC 0.0
FL-Next: tr=Putative carbamoyl phosphate synthase large subunit; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: carbamoyl-phosphate synthase large chain-like 0.0
C-terminus
biog2_v2.0_unigene3397 biogeco2 v2.0 581
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 1-like 0.0
C-terminus
biog2_v2.0_unigene3456 biogeco2 v2.0 316
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
Blast2go: expansin 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain