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Assembly Name: biogeco2 v2.0

Name: Aminoacyl-tRNA synthetase, class I, conserved site

Term: IPR001412  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene77 biogeco2 v2.0 714
AutoFact: PRP38 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor 38b 0.0
N-terminus
biog2_v2.0_unigene146 biogeco2 v2.0 869
AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trehalose-phosphate synthase 0.0
Complete
biog2_v2.0_unigene147 biogeco2 v2.0 549
AutoFact: 2-oxoacid-dependent dioxygenase n=2 Tax=Selaginella moellendorffii RepID=D8R3W5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-oxoacid-dependent dioxygenase 0.0
C-terminus
biog2_v2.0_unigene222 biogeco2 v2.0 957
AutoFact: oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gb|AAD03425.1| contains similarity to Iron/Ascorbate family of oxidoreductases (Pfam: PF00671, Score=297.8, E=1.3e-85, N=1) [Arabidopsis thaliana] emb|CAB40043.1| putative Fe(II)/a 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2og-fe oxygenase family protein 0.0
C-terminus
biog2_v2.0_unigene242 biogeco2 v2.0 574
AutoFact: Flavonoid 3-hydroxylase, putative n=1 Tax=Ricinus communis RepID=B9S5P8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
biog2_v2.0_unigene305 biogeco2 v2.0 971
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
biog2_v2.0_unigene395 biogeco2 v2.0 606
AutoFact: Shaker-like potassium channel n=4 Tax=Vitis vinifera RepID=Q84LA0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaker-like potassium channel 0.0
Internal
biog2_v2.0_unigene505 biogeco2 v2.0 572
AutoFact: Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana] emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE851 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: arginyl-trna synthetase 0.0
Internal
biog2_v2.0_unigene543 biogeco2 v2.0 518
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
N-terminus
biog2_v2.0_unigene581 biogeco2 v2.0 570
AutoFact: flavonoid 3'-hydroxylase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flavonoid 3 -hydroxylase 0.0
C-terminus
biog2_v2.0_unigene608 biogeco2 v2.0 546
AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: nhl repeat-containing protein 0.0
unknown
biog2_v2.0_unigene652 biogeco2 v2.0 701
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Putative Complete
biog2_v2.0_unigene731 biogeco2 v2.0 696
AutoFact: Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] emb|CAB75817.1| putative protein [Arabidopsis thaliana] gb|AAK76594.1| unknown protein [Arabidopsis thaliana] gb|AAM44914.1| unknown protein [Arabidopsis thaliana] gb|AAM63861.1| unknown [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene827 biogeco2 v2.0 766
AutoFact: Trehalose phosphate synthase n=1 Tax=Selaginella moellendorffii RepID=D8QWY1_SELML 0.0
FL-Next: sp=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trehalose phosphate synthase 0.0
Internal
biog2_v2.0_unigene842 biogeco2 v2.0 323
AutoFact: OB-fold nucleic acid binding domain-containing protein n=2 Tax=Arabidopsis RepID=Q93VB0_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene852 biogeco2 v2.0 620
AutoFact: Protein SYM1, putative n=1 Tax=Ricinus communis RepID=B9SNC3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene1020 biogeco2 v2.0 861
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAD39602.1|AC007454_1 Contains a PF|00561 alpha/beta hydrolase fold domain [Arabidopsis thaliana] gb|AAG51902.1|AC023913_10 late embryogenesis abundant protein, putative; 78257-75162 0.0
FL-Next: sp=Embryogenesis-associated protein EMB8; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: embryogenesis-associated protein emb8 0.0
Internal
biog2_v2.0_unigene1102 biogeco2 v2.0 631
AutoFact: YABBY2 like protein [Ruscus aculeatus] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
C-terminus
biog2_v2.0_unigene1228 biogeco2 v2.0 723
AutoFact: RecName: Full=Glutaminyl-tRNA synthetase; AltName: Full=Glutamine--tRNA ligase; Short=GlnRS emb|CAA62901.1| tRNA-glutamine synthetase [Lupinus luteus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutaminyl-trna synthetase 0.0
N-terminus
biog2_v2.0_unigene1258 biogeco2 v2.0 1448
AutoFact: Serine/threonine-protein kinase n=1 Tax=Cucumis melo subsp. melo RepID=E5GB79_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain