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Assembly Name: biogeco2 v2.0

Name: Aminoacyl-tRNA synthetase, class I, conserved site

Term: IPR001412  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1271 biogeco2 v2.0 1563
AutoFact: pfam04774, HABP4_PAI-RBP1, Hyaluronan / mRNA binding family 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear rna binding protein 9.31231e-35
Complete
biog2_v2.0_unigene1403 biogeco2 v2.0 553
AutoFact: XLG1, extra-large G protein n=2 Tax=Selaginella moellendorffii RepID=D8QZS9_SELML 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: extra-large g protein 0.0
C-terminus
biog2_v2.0_unigene1476 biogeco2 v2.0 512
AutoFact: Aspartate kinase, putative n=1 Tax=Ricinus communis RepID=B9SHP2_RICCO 0.0
FL-Next: Isoform 2 of Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 0.0
Blast2go: bifunctional aspartokinase homoserine dehydrogenase 1 0.0
Internal
biog2_v2.0_unigene1736 biogeco2 v2.0 719
AutoFact: XLG1, extra-large G protein n=2 Tax=Selaginella moellendorffii RepID=D8QZS9_SELML 0.0
FL-Next: sp=Guanine nucleotide-binding protein alpha-2 subunit; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: extra-large g protein 0.0
Internal
biog2_v2.0_unigene1827 biogeco2 v2.0 941
AutoFact: YABBY2-like transcription factor YAB2 [Antirrhinum majus] 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: axial regulator yabby 5 0.0
Complete
biog2_v2.0_unigene1839 biogeco2 v2.0 227
AutoFact: Calmodulin-binding protein [Arabidopsis thaliana] dbj|BAB08793.1| calmodulin-binding protein [Arabidopsis thaliana] gb|AAL07138.1| putative calmodulin-binding protein [Arabidopsis thaliana] gb|AAM14373.1| putative calmodulin-binding protein [Arabidopsis t 0.0
FL-Next: tr=Putative calmodulin-binding protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calmodulin-binding protein 0.0
Internal
biog2_v2.0_unigene1871 biogeco2 v2.0 582
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase-like protein 0.0
Internal
biog2_v2.0_unigene1910 biogeco2 v2.0 931
AutoFact: ABI3-interacting protein 2 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF6_9CONI 0.0
FL-Next: tr=ABI3-interacting protein 2; Callitropsis nootkatensis. 0.0
Blast2go: protein frigida-like 0.0
N-terminus
biog2_v2.0_unigene2032 biogeco2 v2.0 530
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Complete
biog2_v2.0_unigene2113 biogeco2 v2.0 363
AutoFact: Oligopeptide transporter, putative n=1 Tax=Ricinus communis RepID=B9SH54_RICCO 0.0
Blast2go: nitrate transporter 0.0
unknown
biog2_v2.0_unigene2376 biogeco2 v2.0 366
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|ABE65859.1| hypothetical protein At2g24320 [Arabidopsis thaliana] gb|AEC07562.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: abhydrolase domain-containing protein fam108c1-like 0.0
unknown
biog2_v2.0_unigene2422 biogeco2 v2.0 154
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
Blast2go: pectin methylesterase 0.0
unknown
biog2_v2.0_unigene2731 biogeco2 v2.0 471
AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AAM13055.1| unknown protein [Arabidopsis thaliana] gb|AAN72090.1| unknown protein [Arabidopsis thaliana] gb|AEE75577.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nhl domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene2960 biogeco2 v2.0 534
AutoFact: PRP38 multi-domain protein 0.0
Blast2go: pre-mrna-splicing factor 38b 0.0
Putative coding
biog2_v2.0_unigene3032 biogeco2 v2.0 891
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
Internal
biog2_v2.0_unigene3158 biogeco2 v2.0 577
AutoFact: SAC domain-containing protein 9 [Arabidopsis thaliana] gb|AAP49842.1| SAC domain protein 9 [Arabidopsis thaliana] gb|AEE79965.1| SAC domain-containing protein 9 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sac domain-containing protein 9 0.0
C-terminus
biog2_v2.0_unigene3257 biogeco2 v2.0 1305
AutoFact: Flavonoid 3' hydroxylase n=3 Tax=Malus x domestica RepID=C5IGQ3_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flavonoid 3 -hydroxylase 0.0
C-terminus
biog2_v2.0_unigene3362 biogeco2 v2.0 1156
AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nhl repeat-containing protein 0.0
C-terminus
biog2_v2.0_unigene3379 biogeco2 v2.0 544
AutoFact: Gibberellin 20-oxidase n=1 Tax=Helianthus annuus RepID=B2G4V7_HELAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gibberellin 20-oxidase 0.0
Internal
biog2_v2.0_unigene3429 biogeco2 v2.0 537
AutoFact: Gibberellin 20-oxidase n=1 Tax=Helianthus annuus RepID=B2G4V7_HELAN 0.0
FL-Next: sp=Gibberellin 20 oxidase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gibberellin 20-oxidase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain