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Assembly Name: biogeco2 v2.0

Name: Aldolase-type TIM barrel

Term: IPR013785  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene55 biogeco2 v2.0 1053
AutoFact: Inosine-5'-monophosphate dehydrogenase n=1 Tax=Picea sitchensis RepID=B8LQF1_PICSI 0.0
FL-Next: sp=Inosine-5'-monophosphate dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene169 biogeco2 v2.0 471
AutoFact: Tryptophan synthase beta chain 2, chloroplastic n=1 Tax=Camptotheca acuminata RepID=TRPB_CAMAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tryptophan synthase beta-subunit 0.0
N-terminus
biog2_v2.0_unigene223 biogeco2 v2.0 358
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
Internal
biog2_v2.0_unigene254 biogeco2 v2.0 786
AutoFact: Delta-aminolevulinic acid dehydratase n=1 Tax=Picea sitchensis RepID=B8LR35_PICSI 0.0
FL-Next: sp=Delta-aminolevulinic acid dehydratase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aminolevulinic acid dehydratase 0.0
C-terminus
biog2_v2.0_unigene420 biogeco2 v2.0 757
AutoFact: Delta-aminolevulinic acid dehydratase n=1 Tax=Picea sitchensis RepID=B8LR35_PICSI 0.0
FL-Next: sp=Delta-aminolevulinic acid dehydratase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aminolevulinic acid dehydratase 0.0
N-terminus
biog2_v2.0_unigene832 biogeco2 v2.0 771
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase [NADH], amyloplastic; Medicago sativa (Alfalfa). 0.0
Blast2go: glutamate synthase 1 0.0
C-terminus
biog2_v2.0_unigene1057 biogeco2 v2.0 502
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dehydroquinate dehydratase shikimate dehydrogenase 0.0
Internal
biog2_v2.0_unigene1086 biogeco2 v2.0 229
AutoFact: 2-isopropylmalate synthase 2, chloroplastic n=3 Tax=Arabidopsis RepID=LEU12_ARATH 0.0
FL-Next: sp=2-isopropylmalate synthase B; Solanum pennellii (Tomato) (Lycopersicon pennellii). 0.0
Blast2go: 2-isopropylmalate synthase 0.0
Internal
biog2_v2.0_unigene1111 biogeco2 v2.0 342
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
N-terminus
biog2_v2.0_unigene1335 biogeco2 v2.0 443
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional 3-dehydroquinate dehydratase shikimate chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene1676 biogeco2 v2.0 1450
AutoFact: transaldolase [Arabidopsis thaliana] gb|AAG12571.1|AC022522_4 Similar to transaldolase [Arabidopsis thaliana] gb|AAN72047.1| expressed protein [Arabidopsis thaliana] gb|AAP37846.1| At1g12230 [Arabidopsis thaliana] gb|AEE28853.1| transaldolase [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transaldolase-like protein 0.0
Complete
biog2_v2.0_unigene1851 biogeco2 v2.0 452
AutoFact: biotin synthase [Brassica rapa subsp. pekinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: biotin synthase 0.0
N-terminus
biog2_v2.0_unigene1948 biogeco2 v2.0 1400
AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 0.0
FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triosephosphate isomerase 0.0
Complete
biog2_v2.0_unigene2070 biogeco2 v2.0 1063
AutoFact: putative 2-dehydro-3-deoxyphosphooctonate aldolase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=2-dehydro-3-deoxyphosphooctonate aldolase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 2-dehydro-3-deoxyphosphooctonate aldolase 0.0
Complete
biog2_v2.0_unigene2127 biogeco2 v2.0 1716
AutoFact: transaldolase-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transaldolase 2 0.0
Complete
biog2_v2.0_unigene2226 biogeco2 v2.0 612
AutoFact: ketose-bisphosphate aldolase class-II-like protein [Arabidopsis thaliana] gb|AAL60010.1| unknown protein [Arabidopsis thaliana] gb|AAM91809.1| unknown protein [Arabidopsis thaliana] gb|AEE29694.1| ketose-bisphosphate aldolase class-II-like protein [Arabid 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: ketose-bisphosphate aldolase class-ii-like protein 0.0
Internal
biog2_v2.0_unigene2281 biogeco2 v2.0 1319
AutoFact: glycosyl hydrolase family-like protein [Salvia miltiorrhiza] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase 0.0
N-terminus
biog2_v2.0_unigene2485 biogeco2 v2.0 1302
AutoFact: ComA domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphosulfolactate synthase-related protein 0.0
Complete
biog2_v2.0_unigene2634 biogeco2 v2.0 1881
AutoFact: UMP synthase [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uridine 5 -monophosphate synthase 0.0
Complete
biog2_v2.0_unigene2678 biogeco2 v2.0 554
AutoFact: [F] COG0167 Dihydroorotate dehydrogenase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydropyrimidine dehydrogenase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain