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Assembly Name: biogeco2 v2.0

Name: Aldolase-type TIM barrel

Term: IPR013785  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene16683 biogeco2 v2.0 348
AutoFact: RecName: Full=tRNA-dihydrouridine synthase 3-like; AltName: Full=Zinc finger CCCH domain-containing protein 50; Short=AtC3H50 emb|CAB38623.1| putative protein [Arabidopsis thaliana] emb|CAB80552.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: trna-dihydrouridine synthase 3-like 0.0
Internal
biog2_v2.0_unigene16857 biogeco2 v2.0 212
AutoFact: Dihydrodipicolinate synthase, putative n=1 Tax=Ricinus communis RepID=B9S6U4_RICCO 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrodipicolinate synthase 3.72105e-37
Internal
biog2_v2.0_unigene16924 biogeco2 v2.0 529
AutoFact: Alpha galactosidase n=2 Tax=Glycine max RepID=Q39811_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha galactosidase 0.0
Internal
biog2_v2.0_unigene17484 biogeco2 v2.0 519
AutoFact: 2-isopropylmalate synthase 2, chloroplastic n=3 Tax=Arabidopsis RepID=LEU12_ARATH 0.0
FL-Next: sp=2-isopropylmalate synthase 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 2-isopropylmalate synthase 0.0
N-terminus
biog2_v2.0_unigene17490 biogeco2 v2.0 500
AutoFact: Aldolase-type TIM barrel family protein [Arabidopsis thaliana] gb|AAK44141.1|AF370326_1 putative 2-nitropropane dioxygenase [Arabidopsis thaliana] dbj|BAB09856.1| 2-nitropropane dioxygenase-like protein [Arabidopsis thaliana] gb|AAL34288.1| putative 2-nit 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-nitropropane dioxygenase family 0.0
C-terminus
biog2_v2.0_unigene17558 biogeco2 v2.0 339
AutoFact: ferredoxin-dependent glutamate synthase [Glycine max] 0.0
Blast2go: ferredoxin-dependent glutamate synthase 0.0
Putative coding
biog2_v2.0_unigene17674 biogeco2 v2.0 448
AutoFact: Alpha-galactosidase n=2 Tax=Solanum lycopersicum RepID=Q9SP05_SOLLC 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase 1 0.0
Internal
biog2_v2.0_unigene17688 biogeco2 v2.0 872
AutoFact: Trytophan synthase alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9S4R8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog2_v2.0_unigene17774 biogeco2 v2.0 830
AutoFact: Dihydrodipicolinate synthase, putative n=1 Tax=Ricinus communis RepID=B9S6U4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrodipicolinate synthase 0.0
C-terminus
biog2_v2.0_unigene18185 biogeco2 v2.0 173
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
Blast2go: glycolate oxidase 0.0
unknown
biog2_v2.0_unigene18768 biogeco2 v2.0 685
AutoFact: alpha-galactosidase [Phaseolus vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha galactosidase 0.0
N-terminus
biog2_v2.0_unigene19103 biogeco2 v2.0 369
AutoFact: alpha-galactosidase 1 [Arabidopsis thaliana] emb|CAC08338.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gb|AED91292.1| alpha-galactosidase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase alpha-n- 0.0
N-terminus
biog2_v2.0_unigene19280 biogeco2 v2.0 437
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: calmodulin-binding heat-shock 0.0
Putative C-terminus
biog2_v2.0_unigene19373 biogeco2 v2.0 255
AutoFact: alpha-galactosidase 1 [Arabidopsis thaliana] emb|CAC08338.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gb|AED91292.1| alpha-galactosidase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase alpha-n- 0.0
Internal
biog2_v2.0_unigene19714 biogeco2 v2.0 900
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisomal -2-hydroxy-acid oxidase 2 0.0
Internal
biog2_v2.0_unigene19791 biogeco2 v2.0 607
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate aldolase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain